RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 SPOPO43791 374 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 SLU7O95391 586 aaKnown RBP12.35□□□□□ -0.43
DDX39A-219ENST00000592927 PRAMEF12O95522 483 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 SPINK2P20155 84 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 CTNNA2P26232 953 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 VIPR2P41587 438 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 RPS9P46781 194 aaKnown RBP12.35□□□□□ -0.43
DDX39A-219ENST00000592927 LIMK1P53667 647 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 TUBB4BP68371 445 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
DDX39A-219ENST00000592927 EFEMP1Q12805 493 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 TANGO2Q6ICL3 276 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 ARCQ7LC44 396 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 MIB1Q86YT6 1006 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 DEFB106AQ8N104 65 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 MNS1Q8NEH6 495 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 USP13Q92995 863 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-219ENST00000592927 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 NCAPGQ9BPX3 1015 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 TMEM121BQ9BXQ6 578 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-219ENST00000592927 KIF9Q9HAQ2 790 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 SMPD4Q9NXE4 827 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 MARCH2Q9P0N8 246 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 ARHGAP26Q9UNA1 814 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 CPQQ9Y646 472 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 GCN1Q92616 2671 aaKnown RBP12.35□□□□□ -0.43
DDX39A-219ENST00000592927 DOCK6Q96HP0 2047 aa12.35□□□□□ -0.43
DDX39A-219ENST00000592927 TMEM110-MUSTN1A8MSY1 372 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 ECI2O75521 394 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 DAB1O75553 588 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 FYNP06241 537 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 DESP17661 470 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 COMTP21964 271 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 FCARP24071 287 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 CTNNA1P35221 906 aaKnown RBP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 COG7P83436 770 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 FZD5Q13467 585 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 SF3A2Q15428 464 aaKnown RBP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 MSANTD2Q6P1R3 559 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 DDX42Q86XP3 938 aaKnown RBP eCLIP12.34□□□□□ -0.434e-6■□□□□ 8.2
DDX39A-219ENST00000592927 SH3RF2Q8TEC5 729 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 CD101Q93033 1021 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 ELSPBP1Q96BH3 223 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 KLF16Q9BXK1 252 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 CARD9Q9H257 536 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 METTL5Q9NRN9 209 aaKnown RBP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 OBP2AQ9NY56 170 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 CCL26Q9Y258 94 aa12.34□□□□□ -0.43
DDX39A-219ENST00000592927 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
DDX39A-219ENST00000592927 SLC12A8A0AV02 714 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 LEFTY2O00292 366 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 KCNK3O14649 394 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 PSTPIP1O43586 416 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 HRO43593 1189 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 NOS2P35228 1153 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 RFC1P35251 1148 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 MATKP42679 507 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 PAFAH1B1P43034 410 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 KPNA1P52294 538 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 RPL7AP62424 266 aaKnown RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 FOXC1Q12948 553 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 SOWAHCQ53LP3 525 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 PSAPL1Q6NUJ1 521 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 TPRG1Q6ZUI0 275 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF572Q7Z3I7 529 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 YAF2Q8IY57 180 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 BPIFB1Q8TDL5 484 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 DQX1Q8TE96 717 aaKnown RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 BTBD6Q96KE9 485 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 GOLPH3Q9H4A6 298 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 GKN1Q9NS71 199 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 THG1LQ9NWX6 298 aaKnown RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 RRN3Q9NYV6 651 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 CFAP97Q9P2B7 532 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 SFMBT1Q9UHJ3 866 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 TMEM59LQ9UK28 342 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 STAP1Q9ULZ2 295 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-219ENST00000592927 SH3BP1Q9Y3L3 701 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF638Q14966 1978 aaKnown RBP12.32□□□□□ -0.44
DDX39A-219ENST00000592927 MYO16Q9Y6X6 1858 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 GJB6O95452 261 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 HMBSP08397 361 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 IRF1P10914 325 aa12.32□□□□□ -0.44
DDX39A-219ENST00000592927 TCF3P15923 654 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms