RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 HRO43593 1189 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 PAPSS2O95340 614 aaPredicted RBP11.93□□□□□ -0.5
VMP1-211ENST00000591315 PDGFRAP16234 1089 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 CCR1P32246 355 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 GBP1P32455 592 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 MRPS21P82921 87 aaKnown RBP11.93□□□□□ -0.5
VMP1-211ENST00000591315 ZBED6P86452 979 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 OGDHQ02218 1023 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 DEUP1Q05D60 604 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 AUHQ13825 339 aaKnown RBP11.93□□□□□ -0.5
VMP1-211ENST00000591315 PPP2R5DQ14738 602 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 ZNF528Q3MIS6 628 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 SLC25A52Q3SY17 297 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 RNF43Q68DV7 783 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 KIAA1211LQ6NV74 962 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 FBXL22Q6P050 247 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 SYT13Q7L8C5 426 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 ASCL5Q7RTU5 278 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 BNIPLQ7Z465 357 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 FAM131BQ86XD5 332 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 CARNMT1Q8N4J0 409 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 ZNF513Q8N8E2 541 aaPredicted RBP11.93□□□□□ -0.5
VMP1-211ENST00000591315 ATP6V0D2Q8N8Y2 350 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 HJURPQ8NCD3 748 aaPredicted RBP11.93□□□□□ -0.5
VMP1-211ENST00000591315 ZBTB44Q8NCP5 570 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 CYB5D2Q8WUJ1 264 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 BTN2A3PQ96KV6 586 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 TRIM7Q9C029 511 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 SIK2Q9H0K1 926 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 ABCB8Q9NUT2 735 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 ZSCAN32Q9NX65 697 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 CACNA2D2Q9NY47 1150 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 MMP17Q9ULZ9 603 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 SLC8A2Q9UPR5 921 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 INVSQ9Y283 1065 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 SLC27A6Q9Y2P4 619 aa11.93□□□□□ -0.5
VMP1-211ENST00000591315 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
VMP1-211ENST00000591315 ITIH6Q6UXX5 1313 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 LILRB5O75023 590 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 ATG13O75143 517 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 CNTN5O94779 1100 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 FTLP02792 175 aaPredicted RBP11.92□□□□□ -0.5
VMP1-211ENST00000591315 CALB1P05937 261 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 CCDC172P0C7W6 258 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 KRT3P12035 628 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 LMAN2Q12907 356 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 CRY1Q16526 586 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 LPAL2Q16609 132 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 TDRD12Q587J7 1177 aaKnown RBP11.92□□□□□ -0.5
VMP1-211ENST00000591315 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 DNAJC24Q6P3W2 148 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 ANKS1BQ7Z6G8 1248 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 ADIPOR2Q86V24 386 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 ALYREFQ86V81 257 aaKnown RBP11.92□□□□□ -0.5
VMP1-211ENST00000591315 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 C3orf20Q8ND61 904 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 OR52K2Q8NGK3 314 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
VMP1-211ENST00000591315 SELENOOQ9BVL4 669 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 SLC6A17Q9H1V8 727 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 WDCPQ9H6R7 721 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 ARHGAP20Q9P2F6 1191 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 INTS6Q9UL03 887 aaKnown RBP11.92□□□□□ -0.5
VMP1-211ENST00000591315 STAP1Q9ULZ2 295 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 STARD13Q9Y3M8 1113 aa11.92□□□□□ -0.5
VMP1-211ENST00000591315 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 A0A1W2PQF6 199 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 SIGLEC16A6NMB1 481 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 F5H5T6 163 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 DCLK1O15075 740 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 CBFA2T2O43439 604 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ENDOD1O94919 500 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 PABPC1P11940 636 aaKnown RBP11.91□□□□□ -0.5
VMP1-211ENST00000591315 ABCB4P21439 1286 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 GPD1P21695 349 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 IL12RB1P42701 662 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
VMP1-211ENST00000591315 HDAC4P56524 1084 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 GSCP56915 257 aaPredicted RBP11.91□□□□□ -0.5
VMP1-211ENST00000591315 FUT11Q495W5 492 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 SPECC1LQ69YQ0 1117 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ANO7Q6IWH7 933 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 CHST9Q7L1S5 443 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ARCQ7LC44 396 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 KIAA0907Q7Z7F0 614 aaPredicted RBP11.91□□□□□ -0.5
VMP1-211ENST00000591315 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ZNF683Q8IZ20 524 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 CHPFQ8IZ52 775 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 CCDC185Q8N715 623 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ZNF366Q8N895 744 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 FAM172AQ8WUF8 416 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
VMP1-211ENST00000591315 ACDQ96AP0 544 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 MCEEQ96PE7 176 aa11.91□□□□□ -0.5
VMP1-211ENST00000591315 DDX50Q9BQ39 737 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms