RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 NUP93Q8N1F7 819 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 ARL14Q8N4G2 192 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 OXR1Q8N573 874 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 SPATA20Q8TB22 786 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 CYB5D2Q8WUJ1 264 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 UCMAQ8WVF2 138 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 HPS3Q969F9 1004 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 SKA1Q96BD8 255 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 SERAC1Q96JX3 654 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 APOLD1Q96LR9 279 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 B3GNT5Q9BYG0 378 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 RSPH9Q9H1X1 276 aaPredicted RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 ADNPQ9H2P0 1102 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 PABPC3Q9H361 631 aaKnown RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 KDM4CQ9H3R0 1056 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 MTG2Q9H4K7 406 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS25-204ENST00000589577 FAM13BQ9NYF5 915 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 ANAPC2Q9UJX6 822 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 ACSL6Q9UKU0 697 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 AGO2Q9UKV8 859 aaKnown RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 NAV3Q8IVL0 2385 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 SHANK1Q9Y566 2161 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 K7ENM7 598 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 PPP6R2O75170 966 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 STC2O76061 302 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 RTN3O95197 1032 aaPredicted RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 IL18RAPO95256 599 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 SLC5A2P31639 672 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 LONP1P36776 959 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 UBA7P41226 1012 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 NASPP49321 788 aaPredicted RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 CCR5P51681 352 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 POU5F1Q01860 360 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 KCNAB2Q13303 367 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 MORC3Q14149 939 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 SLC39A14Q15043 492 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 IL17AQ16552 155 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 FNDC3BQ53EP0 1204 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 ZNF776Q68DI1 518 aaPredicted RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 NAPEPLDQ6IQ20 393 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 PAQR9Q6ZVX9 377 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 DPH6Q7L8W6 267 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 HS2ST1Q7LGA3 356 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 SRRM1Q8IYB3 904 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 CSGALNACT2Q8N6G5 542 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 SYT2Q8N9I0 419 aaPredicted RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 MFSD2AQ8NA29 543 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 OR2T34Q8NGX1 318 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 IFI44Q8TCB0 444 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 MAPK15Q8TD08 544 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 ARRDC3Q96B67 414 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 CALML4Q96GE6 196 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 AK8Q96MA6 479 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 USP28Q96RU2 1077 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 MRPL45Q9BRJ2 306 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 MTMR12Q9C0I1 747 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 ELOVL4Q9GZR5 314 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 NACA2Q9H009 215 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 NEUROG2Q9H2A3 272 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 FBRSQ9HAH7 460 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 CYLDQ9NQC7 956 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 TMPRSS4Q9NRS4 437 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 WDR70Q9NW82 654 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 FBXL12Q9NXK8 326 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 ARHGAP20Q9P2F6 1191 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 LARSQ9P2J5 1176 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 TFIP11Q9UBB9 837 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 CCDC39Q9UFE4 941 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 HOOK1Q9UJC3 728 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 LSM7Q9UK45 103 aaKnown RBP6.38□□□□□ -1.39
VPS25-204ENST00000589577 ITGA11Q9UKX5 1188 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 PCDHGA7Q9Y5G6 932 aa6.38□□□□□ -1.39
VPS25-204ENST00000589577 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
VPS25-204ENST00000589577 DCHS2Q6V1P9 2916 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 A0A1W2PP55 124 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 VWA3AA6NCI4 1184 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 WIPF3A6NGB9 483 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 H0YCG3 227 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 MID1O15344 667 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 MTSS1O43312 755 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 CUTAO60888 179 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 SEMA7AO75326 666 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 AGFG2O95081 481 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 CLDN1O95832 211 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 KRT19P08727 400 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 LIPCP11150 499 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 PTPN1P18031 435 aaKnown RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 HLA-FP30511 346 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 ZNF131P52739 623 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 ADPRHP54922 357 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 POLE2P56282 527 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 GTF2BQ00403 316 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 DRAP1Q14919 205 aaPredicted RBP6.37□□□□□ -1.39
VPS25-204ENST00000589577 C1QL3Q5VWW1 255 aa6.37□□□□□ -1.39
VPS25-204ENST00000589577 FAM173BQ6P4H8 233 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms