RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 EBF4Q9BQW3 602 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDX39A-206ENST00000587730 COPG2Q9UBF2 871 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 BCAP29Q9UHQ4 241 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 AKT3Q9Y243 479 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 EIF4E1BA6NMX2 242 aaKnown RBP19.09■□□□□ 0.65
DDX39A-206ENST00000587730 KPNA7A9QM74 516 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 SLC22A2O15244 555 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 MPOP05164 745 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 RALBP11234 206 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 PIM1P11309 404 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-206ENST00000587730 INSRRP14616 1297 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 HADHAP40939 763 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 IDH3AP50213 366 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 SERPINB8P50452 374 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 PRKAA2P54646 552 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 CDC16Q13042 620 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 MDH1BQ5I0G3 518 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 ZCCHC23Q6ZST2 131 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 PDZD4Q76G19 769 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-206ENST00000587730 ACOT1Q86TX2 421 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 ZNF410Q86VK4 478 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 COLGALT1Q8NBJ5 622 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 BEST2Q8NFU1 509 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 CLMNQ96JQ2 1002 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 KCTD15Q96SI1 283 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-206ENST00000587730 TSPAN18Q96SJ8 248 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 TTC1Q99614 292 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 MTMR10Q9NXD2 777 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 GGA3Q9NZ52 723 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 IGSF9Q9P2J2 1179 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 USP3Q9Y6I4 520 aa19.09■□□□□ 0.65
DDX39A-206ENST00000587730 TSPAN1O60635 241 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 USP2O75604 605 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-206ENST00000587730 APOA4P06727 396 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 CPA3P15088 417 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 TYK2P29597 1187 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 SPRP35270 261 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-206ENST00000587730 MAGEA12P43365 314 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 RPL10AP62906 217 aaKnown RBP19.08■□□□□ 0.64
DDX39A-206ENST00000587730 VGLL4Q14135 290 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 PRAMEF18Q5VWM3 479 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 MTHFD1LQ6UB35 978 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 LCA5Q86VQ0 697 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 RASSF3Q86WH2 238 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 NME8Q8N427 588 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 OR6Y1Q8NGX8 325 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 ZNF668Q96K58 619 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-206ENST00000587730 MMP19Q99542 508 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 MROH8Q9H579 483 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 ZNF395Q9H8N7 513 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-206ENST00000587730 CPSF2Q9P2I0 782 aaKnown RBP19.08■□□□□ 0.64
DDX39A-206ENST00000587730 ARHGAP26Q9UNA1 814 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 PCDHB12Q9Y5F1 795 aa19.08■□□□□ 0.64
DDX39A-206ENST00000587730 ERI2A8K979 691 aaKnown RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 BUD23O43709 281 aaKnown RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 SNUPNO95149 360 aaKnown RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CDC42EP1Q00587 391 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PCBP1Q15365 356 aaKnown RBP eCLIP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PDPK2PQ6A1A2 396 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PDSS2Q86YH6 399 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CPB2Q96IY4 423 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CLPTM1LQ96KA5 538 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 ZNF778Q96MU6 729 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 BTBD9Q96Q07 612 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 MRPL45Q9BRJ2 306 aaKnown RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 TRIM4Q9C037 500 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 KLHL4Q9C0H6 718 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 LRRC40Q9H9A6 602 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 SNX9Q9Y5X1 595 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 SLC4A7Q9Y6M7 1214 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 A0A0G2JLL6 359 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 AP3B1O00203 1094 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 RNF103O00237 685 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 MATKP42679 507 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 AIF1P55008 147 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PRKG1Q13976 671 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CFAP157Q5JU67 520 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 RNF220Q5VTB9 566 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 DPY19L2Q6NUT2 758 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 GADL1Q6ZQY3 521 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PRRT2Q7Z6L0 340 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 TMEM126BQ8IUX1 230 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CRYBG2Q8N1P7 616 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CERS2Q96G23 380 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 SORT1Q99523 831 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 RTKNQ9BST9 563 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 BRD8Q9H0E9 1235 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 NDUFA13Q9P0J0 144 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 CDH22Q9UJ99 828 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PPM1HQ9ULR3 514 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 FZD10Q9ULW2 581 aa19.07■□□□□ 0.64
DDX39A-206ENST00000587730 PRPF19Q9UMS4 504 aaKnown RBP19.07■□□□□ 0.64
DDX39A-206ENST00000587730 MAGEB16A2A368 324 aa19.06■□□□□ 0.64
DDX39A-206ENST00000587730 CXCL11O14625 94 aa19.06■□□□□ 0.64
DDX39A-206ENST00000587730 ITM2AO43736 263 aa19.06■□□□□ 0.64
DDX39A-206ENST00000587730 ADSLP30566 484 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-206ENST00000587730 IFRD2Q12894 506 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-206ENST00000587730 MED21Q13503 144 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms