RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 CES2O00748 559 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 SPRY2O43597 315 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 PPP6R2O75170 966 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 CER1O95813 267 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 CD53P19397 219 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 YY1P25490 414 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 DDIT3P35638 169 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 E2F1Q01094 437 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 TLE2Q04725 743 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 BFSP2Q13515 415 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 RABEP1Q15276 862 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 SMAD1Q15797 465 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 CYP1B1Q16678 543 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 SUPT20HL1Q3ZLR7 823 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 AARS2Q5JTZ9 985 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 SLC2A7Q6PXP3 512 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 LRRTM4Q86VH4 590 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 TMEM57Q8N5G2 664 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 NAXEQ8NCW5 288 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 IL17REQ8NFR9 667 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 AFG1LQ8WV93 481 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 TFAP2BQ92481 460 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 TBC1D5Q92609 795 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 GOLGA1Q92805 767 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 CTHRC1Q96CG8 243 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 REXO5Q96IC2 774 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 TMEM79Q9BSE2 394 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 FSD1LQ9BXM9 530 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 NOD2Q9HC29 1040 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 DUSP22Q9NRW4 184 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 PI4KBQ9UBF8 816 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 MGAT4CQ9UBM8 478 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 DKK3Q9UBP4 350 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 SLC13A4Q9UKG4 626 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 BAG5Q9UL15 447 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 ZBTB1Q9Y2K1 713 aa4.22□□□□□ -1.73
SMCHD1-209ENST00000583441 CCDC196A0A1B0GTZ2 297 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 A0A1B0GVC2 190 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 RRN3P2A6NIE6 340 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 MBD3L5A6NJ08 208 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 PPP6CO00743 305 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 SEPT4O43236 478 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 WDHD1O75717 1129 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 PCSK6P29122 969 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 CYP2C18P33260 490 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 MCM5P33992 734 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 PRKAA2P54646 552 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 EEFSECP57772 596 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 VAMP2P63027 116 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 CCDC15Q0P6D6 951 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 TBX2Q13207 712 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 DNASE1L3Q13609 305 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 CUL4BQ13620 913 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 FAM110CQ1W6H9 321 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 JAKMIP3Q5VZ66 844 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 DPY19L3Q6ZPD9 716 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 ANKS1BQ7Z6G8 1248 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 HERC6Q8IVU3 1022 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 USP38Q8NB14 1042 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 OR52L2PQ8NGH6 319 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 SLC22A17Q8WUG5 538 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 RNF26Q9BY78 433 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 MAF1Q9H063 256 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 CCDC134Q9H6E4 229 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 RIC8AQ9NPQ8 531 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 ADAMTS5Q9UNA0 930 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 PCDHB7Q9Y5E2 793 aa4.21□□□□□ -1.74
SMCHD1-209ENST00000583441 LOC105369274A0A096LPK9 316 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 LOC102723532A0A0G2JNH3 316 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 SAC3D1A6NKF1 404 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 C3orf70A6NLC5 250 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 SLC38A8A6NNN8 435 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 KIF28PB7ZC32 967 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 E7EVH7 732 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 H0YIZ8 118 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 AP4M1O00189 453 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 NKX2-8O15522 239 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 HNRNPRO43390 633 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 EBLN1P0CF75 366 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 XBP1P17861 261 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 THBS4P35443 961 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 IGHMBP2P38935 993 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 CCT8P50990 548 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 RBM6P78332 1123 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 TLE3Q04726 772 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 RALBP1Q15311 655 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 ANKRD1Q15327 319 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 FAM187BQ17R55 369 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 AAK1Q2M2I8 961 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 INTS11Q5TA45 600 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 GRHL2Q6ISB3 625 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 ACSM6Q6P461 480 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 SUGP1Q8IWZ8 645 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 OR4N4Q8N0Y3 316 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 SLC2A12Q8TD20 617 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 GLMPQ8WWB7 406 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 HERVK_113Q902F9 699 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 PPM1MQ96MI6 270 aa4.2□□□□□ -1.74
SMCHD1-209ENST00000583441 SH2D3AQ9BRG2 576 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms