RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZXDBP98169 803 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 GALEQ14376 348 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 PTGR1Q14914 329 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 PGM5Q15124 567 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 TMEM196Q5HYL7 178 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 CRTC1Q6UUV9 634 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 KYAT3Q6YP21 454 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 ADHFE1Q8IWW8 467 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 KRT78Q8N1N4 520 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 EME1Q96AY2 570 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 TTLL2Q9BWV7 592 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 ANAPC4Q9UJX5 808 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 EID1Q9Y6B2 187 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 RALGAPBQ86X10 1494 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 NOTCH4Q99466 2003 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ANKRD30AQ9BXX3 1397 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 CDK13Q14004 1512 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 DISP1Q96F81 1524 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ARHGEF12Q9NZN5 1544 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ARRB2P32121 409 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ZNF84P51523 738 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 RRP1P56182 461 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 SEMA5AQ13591 1074 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ELF2Q15723 593 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 SMTNL2Q2TAL5 461 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 FAM90A2PQ658T7 463 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 C18orf65Q6ZTR6 163 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 RHPN2Q8IUC4 686 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ARL14EPQ8N8R7 260 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 JDP2Q8WYK2 163 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 GJA10Q969M2 543 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 LRRC46Q96FV0 321 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 STRBPQ96SI9 672 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 PIMREGQ9BSJ6 248 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 CORO2BQ9UQ03 480 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 SNX13Q9Y5W8 968 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 TROQ12816 1431 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 FRMPD2Q68DX3 1309 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 ZNF644Q9H582 1327 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 NUP153P49790 1475 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 KIF14Q15058 1648 aa4.68□□□□□ -1.66
SMCHD1-208ENST00000583344 PBRM1Q86U86 1689 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 KDM5DQ9BY66 1539 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 GPATCH8Q9UKJ3 1502 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 ADAMTS12P58397 1594 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 PTPRGP23470 1445 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 LOC102724159A0A0B4J2E5 919 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 A6NNC1 897 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 PEX14O75381 377 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 IL18RAPO95256 599 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 TNFRSF8P28908 595 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 HOXA11P31270 313 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 STAT6P42226 847 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 POLD2P49005 469 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 AGTR2P50052 363 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 PWP2Q15269 919 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 TTLL5Q6EMB2 1281 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 DHRS13Q6UX07 377 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 KRT28Q7Z3Y7 464 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 EXOC8Q8IYI6 725 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 IQCDQ96DY2 449 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 TMEM204Q9BSN7 226 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 BTBD1Q9H0C5 482 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 MYLK2Q9H1R3 596 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 CFDP1Q9UEE9 299 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 RAPGEF6Q8TEU7 1601 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 ADCY10Q96PN6 1610 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 ADGBQ8N7X0 1667 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 CLASP1Q7Z460 1538 aa4.67□□□□□ -1.66
SMCHD1-208ENST00000583344 PARD3Q8TEW0 1356 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 KIR2DS5A0A0G2JLQ3 304 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 CCDC194A0A1B0GVG4 234 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 H0YGN5 161 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 KIR2DS3K7RE56 304 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 TGFB3P10600 412 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 CHRNB1P11230 501 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 ALADP13716 330 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 RHCEP18577 417 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 MATN1P21941 496 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 MST1P26927 711 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 PGGT1BP53609 377 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 GBX1Q14549 363 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 DLGAP5Q15398 846 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 KLHDC7AQ5VTJ3 777 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 FMNL3Q8IVF7 1028 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 CCAR1Q8IX12 1150 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 DCP1BQ8IZD4 617 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 EXOC6Q8TAG9 804 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 MORC4Q8TE76 937 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 ABHD5Q8WTS1 349 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 KAT2BQ92831 832 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 MIB2Q96AX9 1013 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 ZNF845Q96IR2 970 aaPredicted RBP4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 UNKQ9C0B0 810 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 ZBTB26Q9HCK0 441 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 ZNF112Q9UJU3 913 aa4.66□□□□□ -1.66
SMCHD1-208ENST00000583344 UTS2RQ9UKP6 389 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms