RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 AOX1Q06278 1338 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 STX16-NPEPL1H3BU86 382 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 STX16O14662 325 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 ALDOAP04075 364 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 PYGLP06737 847 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 SLC37A1P57057 533 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 SLC12A1Q13621 1099 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 PFKFB3Q16875 520 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 FAM110CQ1W6H9 321 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 PROSER3Q2NL68 480 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 CERKLQ49MI3 558 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 RINLQ6ZS11 566 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 RASGRP2Q7LDG7 609 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 LAS2Q8IYD9 372 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 SRFBP1Q8NEF9 429 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 ASB2Q96Q27 587 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 RNF26Q9BY78 433 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 ARHGAP39Q9C0H5 1083 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 NUAK2Q9H093 628 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 R3HDMLQ9H3Y0 253 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 DERAQ9Y315 318 aa6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 RRP7AQ9Y3A4 280 aaKnown RBP6.27□□□□□ -1.41
SMARCE1-219ENST00000583294 SPATA31A1Q5TZJ5 1347 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 SPATA31A6Q5VVP1 1343 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 RRN3P2A6NIE6 340 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 TISP43B9A030 160 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 TMEM232C9JQI7 657 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 TFRCP02786 760 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 POLBP06746 335 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 SFPQP23246 707 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 HOXD12P35452 270 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 PCP4P48539 62 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 SHC2P98077 582 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 TFF2Q03403 129 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 ZNF484Q5JVG2 852 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 SLC39A5Q6ZMH5 540 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 FSIP1Q8NA03 581 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 ASB12Q8WXK4 309 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 CELF1Q92879 486 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 ARRDC3Q96B67 414 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 PIGSQ96S52 555 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 PDE11AQ9HCR9 933 aa6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 COPG1Q9Y678 874 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-219ENST00000583294 MANSC4A6NHS7 340 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 C3orf70A6NLC5 250 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 PRRT4C9JH25 899 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 CHRM5P08912 532 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 CYP2A6P11509 494 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 PAX3P23760 479 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 ELLP55199 621 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 DCTN1Q14203 1278 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 RD3Q7Z3Z2 195 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 ANKS1BQ7Z6G8 1248 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 CPOQ8IVL8 374 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 LINS1Q8NG48 757 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 SLC2A12Q8TD20 617 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 ZNF764Q96H86 408 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 RBM17Q96I25 401 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 EIF2AK1Q9BQI3 630 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 ABHD14AQ9BUJ0 271 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 EFHD1Q9BUP0 239 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 TRIM2Q9C040 744 aa6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 OSBPL5Q9H0X9 879 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 LRRFIP2Q9Y608 721 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 SIRT4Q9Y6E7 314 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-219ENST00000583294 CYP3A7-CYP3A51PA0A087WV96 503 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 GRM8O00222 908 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 NCAM2O15394 837 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 AGR2O95994 175 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 CYP3A7P24462 503 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 IDUAP35475 653 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 ZNF84P51523 738 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 NANOS3P60323 173 aaKnown RBP6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 TUBA4AP68366 448 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 SEC23BQ15437 767 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 DHRS13Q6UX07 377 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 TFAP2DQ7Z6R9 452 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 LRRTM4Q86VH4 590 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 PNISRQ8TF01 805 aaKnown RBP6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 KCNJ9Q92806 393 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 KTI12Q96EK9 354 aaPredicted RBP6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 ZNF845Q96IR2 970 aaPredicted RBP6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 SENP7Q9BQF6 1050 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 HTATIP2Q9BUP3 242 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 HERC2P3Q9BVR0 1158 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 CLPBQ9H078 707 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 TMLHEQ9NVH6 421 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 GGA3Q9NZ52 723 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 DNAJC16Q9Y2G8 782 aa6.24□□□□□ -1.41
SMARCE1-219ENST00000583294 RRHO14718 337 aa6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 SEPT4O43236 478 aa6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 HNRNPRO43390 633 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 PROP1O75360 226 aa6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 CSF1P09603 554 aa6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 ALDOCP09972 364 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 RFPL3SP0C7P2 107 aa6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 LYL1P12980 280 aa6.23□□□□□ -1.41
SMARCE1-219ENST00000583294 ACP5P13686 325 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms