RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	SLC26A11	Q86WA9	606 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	KIF2B	Q8N4N8	673 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	CNGB3	Q9NQW8	809 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	IQANK1	A0A1B0GTG1	560 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	SRGAP2B	P0DMP2	458 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	HNRNPH1	P31943	449 aa	Known RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	TPI1	P60174	286 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	DSC3	Q14574	896 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	PID1	Q7Z2X4	250 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	TAC4	Q86UU9	113 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	MCU	Q8NE86	351 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	KLHDC9	Q8NEP7	349 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	SIK2	Q9H0K1	926 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	PPCS	Q9HAB8	311 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	NPHS2	Q9NP85	383 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	FBXW11	Q9UKB1	542 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	TTC36	A6NLP5	189 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	MSI1	O43347	362 aa	Known RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	EDF1	O60869	148 aa	Known RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	ZWINT	O95229	277 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	TPSB2	P20231	275 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	TPSAB1	Q15661	275 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	PLEKHG4	Q58EX7	1191 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	INTS6L	Q5JSJ4	861 aa	Known RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	RSPH1	Q8WYR4	309 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	PGBD4	Q96DM1	585 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	APOL2	Q9BQE5	337 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	WDCP	Q9H6R7	721 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	UBP1	Q9NZI7	540 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	KLHL14	Q9P2G3	628 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	OR12D3	Q9UGF7	316 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	DCTN4	Q9UJW0	460 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	NUMBL	Q9Y6R0	609 aa		12.5	□□□□□ -0.41
STRADA-222	ENST00000583085	PCSK1	P29120	753 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	RPL9	P32969	192 aa	Known RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	MBTPS1	Q14703	1052 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	NAIF1	Q69YI7	327 aa	Predicted RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	OVOS1	Q6IE37	1185 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	RNF34	Q969K3	372 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	GORASP1	Q9BQQ3	440 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	SFMBT1	Q9UHJ3	866 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PTPRD	P23468	1912 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	ZNF623	O75123	536 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	NEBL	O76041	1014 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	DDHD2	O94830	711 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	FBXO21	O94952	628 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PRKCH	P24723	683 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	SLC18A1	P54219	525 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	KCNJ2	P63252	427 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	SEMA3B	Q13214	749 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	GSDMB	Q8TAX9	411 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PNPLA8	Q9NP80	782 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	SYBU	Q9NX95	663 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PSAT1	Q9Y617	370 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	NLRC5	Q86WI3	1866 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	E2F8	A0AVK6	867 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	C2orf71	A6NGG8	1288 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	LRIG2	O94898	1065 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	BGN	P21810	368 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	EPHB2	P29323	1055 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PAFAH1B3	Q15102	231 aa	Known RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PDK1	Q15118	436 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	FAM171B	Q6P995	826 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	ARNTL2	Q8WYA1	636 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	SRPK1	Q96SB4	655 aa	Known RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	ECT2	Q9H8V3	914 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PCMTD2	Q9NV79	361 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	PTCH2	Q9Y6C5	1203 aa		12.49	□□□□□ -0.41
STRADA-222	ENST00000583085	RFPL1	O75677	317 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	RASSF9	O75901	435 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	TSHR	P16473	764 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	ETV4	P43268	484 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	NUMB	P49757	651 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	NEK3	P51956	506 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	NCALD	P61601	193 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	IRX4	P78413	519 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	ZBTB17	Q13105	803 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	TUSC3	Q13454	348 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	TRIM71	Q2Q1W2	868 aa	Known RBP	12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	SWT1	Q5T5J6	900 aa	Known RBP	12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	ARHGAP36	Q6ZRI8	547 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	OR52K1	Q8NGK4	314 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	STAMBPL1	Q96FJ0	436 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	APOPT1	Q96IL0	206 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	B3GALT6	Q96L58	329 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	PKMYT1	Q99640	499 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	ACBD6	Q9BR61	282 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	CSNK1G1	Q9HCP0	422 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	PCDHA11	Q9Y5I1	949 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	CCDC78	A2IDD5	438 aa		12.48	□□□□□ -0.41
STRADA-222	ENST00000583085	SPAG6	O75602	509 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms