RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 LRRIQ3A6PVS8 624 aaPredicted RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 C10orf142B7Z368 130 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 TLR4O00206 839 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 TRIM38O00635 465 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 EIF3DO15371 548 aaKnown RBP eCLIP15.76■□□□□ 0.11
IFT20-212ENST00000582797 SIGLEC6O43699 453 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 RNASEH2AO75792 299 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 DLDP09622 509 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 PABPC1P11940 636 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 RXRGP48443 463 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 RABEP1Q15276 862 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 KIAA0907Q7Z7F0 614 aaPredicted RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 UNC93AQ86WB7 457 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 AHI1Q8N157 1196 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 SNRNP27Q8WVK2 155 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 CDK5RAP1Q96SZ6 601 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 PNPLA8Q9NP80 782 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 SRPRBQ9Y5M8 271 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 USP3Q9Y6I4 520 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 UTP20O75691 2785 aaKnown RBP15.76■□□□□ 0.11
IFT20-212ENST00000582797 KIF26BQ2KJY2 2108 aa15.76■□□□□ 0.11
IFT20-212ENST00000582797 TLN1Q9Y490 2541 aaKnown RBP15.75■□□□□ 0.11
IFT20-212ENST00000582797 LRRC72A6NJI9 287 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 SIN3BO75182 1162 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 USP12O75317 370 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 C4BPAP04003 597 aaKnown RBP15.75■□□□□ 0.11
IFT20-212ENST00000582797 CD70P32970 193 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 ASPAP45381 313 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 SGSHP51688 502 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 PDE4CQ08493 712 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 CST6Q15828 149 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 COLEC12Q5KU26 742 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 RSRC2Q7L4I2 434 aaKnown RBP15.75■□□□□ 0.11
IFT20-212ENST00000582797 BRAPQ7Z569 592 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 PDILTQ8N807 584 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.75■□□□□ 0.11
IFT20-212ENST00000582797 OR2T34Q8NGX1 318 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 MYO19Q96H55 970 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 VCPIP1Q96JH7 1222 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 ERVMER34-1Q9H9K5 563 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 ASCL3Q9NQ33 180 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 SUN2Q9UH99 717 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 IL17BQ9UHF5 180 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 SCML1Q9UN30 329 aa15.75■□□□□ 0.11
IFT20-212ENST00000582797 USP9XQ93008 2570 aaPredicted RBP15.75■□□□□ 0.11
IFT20-212ENST00000582797 LRRK2Q5S007 2527 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 BSNQ9UPA5 3926 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 DXOO77932 396 aaKnown RBP15.74■□□□□ 0.11
IFT20-212ENST00000582797 P4HA1P13674 534 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 CCR5P51681 352 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 PPP2CBP62714 309 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 PPP2CAP67775 309 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 E2F1Q01094 437 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 CDCP2Q5VXM1 449 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 MMAAQ8IVH4 418 aaKnown RBP15.74■□□□□ 0.11
IFT20-212ENST00000582797 OXR1Q8N573 874 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 PLD4Q96BZ4 506 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 OMDQ99983 421 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 STRIP2Q9ULQ0 834 aa15.74■□□□□ 0.11
IFT20-212ENST00000582797 STX6O43752 255 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 CSO75390 466 aaKnown RBP15.73■□□□□ 0.11
IFT20-212ENST00000582797 ATP5BP06576 529 aaKnown RBP15.73■□□□□ 0.11
IFT20-212ENST00000582797 POLR2EP19388 210 aaKnown RBP15.73■□□□□ 0.11
IFT20-212ENST00000582797 LSSP48449 732 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 ERVPABLB-1P60509 514 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 YWHAGP61981 247 aaKnown RBP eCLIP15.73■□□□□ 0.11
IFT20-212ENST00000582797 DLG4P78352 724 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 DAB2P98082 770 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 NFATC3Q12968 1075 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 TRIP4Q15650 581 aaPredicted RBP15.73■□□□□ 0.11
IFT20-212ENST00000582797 FAM26FQ5R3K3 315 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 LSMEM2Q8N112 164 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 AADATQ8N5Z0 425 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 PARD3BQ8TEW8 1205 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 SNX21Q969T3 373 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 DUSP16Q9BY84 665 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 DPH1Q9BZG8 443 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 CAAP1Q9H8G2 361 aa15.73■□□□□ 0.11
IFT20-212ENST00000582797 OPA1O60313 960 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 EXOC3O60645 756 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 RNASEH1O60930 286 aaKnown RBP15.72■□□□□ 0.11
IFT20-212ENST00000582797 SLC8A1P32418 973 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 PSMD8P48556 350 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 ADPRHP54922 357 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 CLDN10P78369 228 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 CEBPZQ03701 1054 aaKnown RBP15.72■□□□□ 0.11
IFT20-212ENST00000582797 INCA1Q0VD86 236 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 ZNF211Q13398 564 aaPredicted RBP15.72■□□□□ 0.11
IFT20-212ENST00000582797 SGSM1Q2NKQ1 1148 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 HNRNPA1L2Q32P51 320 aaKnown RBP15.72■□□□□ 0.11
IFT20-212ENST00000582797 SLC45A4Q5BKX6 768 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 PPP1R26Q5T8A7 1209 aaPredicted RBP15.72■□□□□ 0.11
IFT20-212ENST00000582797 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 SLC25A45Q8N413 288 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 TMA16Q96EY4 203 aaKnown RBP15.72■□□□□ 0.11
IFT20-212ENST00000582797 DEPDC7Q96QD5 511 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 FAM117AQ9C073 453 aa15.72■□□□□ 0.11
IFT20-212ENST00000582797 POLR1BQ9H9Y6 1135 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms