RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	GOLGA1	Q92805	767 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	FAM149B1	Q96BN6	582 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PRICKLE1	Q96MT3	831 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CEP63	Q96MT8	703 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ZDHHC5	Q9C0B5	715 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PRSS16	Q9NQE7	514 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ST7	Q9NRC1	585 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	HOOK1	Q9UJC3	728 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NFE2L3	Q9Y4A8	694 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CHD6	Q8TD26	2715 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FAM47DP	A6NHR8	397 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114		H0Y626	953 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KCNK3	O14649	394 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FSBP	O95073	299 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TRIM16	O95361	564 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SEMA4F	O95754	770 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CER1	O95813	267 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DNTT	P04053	509 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ATP5B	P06576	529 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DLD	P09622	509 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KRT5	P13647	590 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BMP6	P22004	513 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RPS24	P62847	133 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NUGGC	Q68CJ6	796 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DENND1B	Q6P3S1	775 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MMS22L	Q6ZRQ5	1243 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SCUBE3	Q8IX30	993 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CFAP52	Q8N1V2	620 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SCML4	Q8N228	414 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	LMO3	Q8TAP4	145 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DQX1	Q8TE96	717 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GANC	Q8TET4	914 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	IRGQ	Q8WZA9	623 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FCRL2	Q96LA5	508 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KREMEN1	Q96MU8	473 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BTBD1	Q9H0C5	482 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NUCKS1	Q9H1E3	243 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TM7SF3	Q9NS93	570 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	XPO7	Q9UIA9	1087 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PCOLCE2	Q9UKZ9	415 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NAALADL1	Q9UQQ1	740 aa		12.08	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PPP1R3G	B7ZBB8	358 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FBXO21	O94952	628 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FYN	P06241	537 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CSK	P41240	450 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CTSO	P43234	321 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CETN1	Q12798	172 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KCNH2	Q12809	1159 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	HNRNPD	Q14103	355 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	STIL	Q15468	1287 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KIF19	Q2TAC6	998 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FSCB	Q5H9T9	825 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZNF776	Q68DI1	518 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SLCO6A1	Q86UG4	719 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TAC4	Q86UU9	113 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MARCH9	Q86YJ5	346 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DHX40	Q8IX18	779 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	HJURP	Q8NCD3	748 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	C1orf216	Q8TAB5	229 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BIRC7	Q96CA5	298 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	HSFY1	Q96LI6	401 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TIGD1	Q96MW7	591 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	INTS2	Q9H0H0	1204 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TM9SF3	Q9HD45	589 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ACP6	Q9NPH0	428 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	INTS6	Q9UL03	887 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BTBD3	Q9Y2F9	522 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GTF3C3	Q9Y5Q9	886 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SNX11	Q9Y5W9	270 aa		12.07	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	FREM2	Q5SZK8	3169 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TMEM131	Q92545	1883 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DMXL2	Q8TDJ6	3036 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TYW5	A2RUC4	315 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PMM2	O15305	246 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	IRAK2	O43187	625 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CBFA2T3	O75081	653 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SIN3B	O75182	1162 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	LETM1	O95202	739 aa	Predicted RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GPD2	P43304	727 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	AFF3	P51826	1226 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ST8SIA6	P61647	398 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	NUCB2	P80303	420 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	IL9R	Q01113	521 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RING1	Q06587	406 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SCAP	Q12770	1279 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CDH18	Q13634	790 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	TTC31	Q49AM3	519 aa	Predicted RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CCDC157	Q569K6	752 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	DCAF6	Q58WW2	860 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KCNT1	Q5JUK3	1230 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MPP7	Q5T2T1	576 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	SYPL2	Q5VXT5	272 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RAP1GAP2	Q684P5	730 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	IL27RA	Q6UWB1	636 aa		12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ADAT2	Q7Z6V5	191 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CIR1	Q86X95	450 aa	Predicted RBP	12.06	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CREBRF	Q8IUR6	639 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms