RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SIGLEC16A6NMB1 481 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 IRAK2O43187 625 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 LILRB5O75023 590 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 LATS1O95835 1130 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TRUB2O95900 331 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 FTCDO95954 541 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 CYP1A2P05177 515 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 SLC2A3P11169 496 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 RRM1P23921 792 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TBX4P57082 545 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 ERCC6LQ2NKX8 1250 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 MAP9Q49MG5 647 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 SYPL2Q5VXT5 272 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 DCUN1D2Q6PH85 259 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 HTR3DQ70Z44 454 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TAC4Q86UU9 113 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 UNC45BQ8IWX7 931 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 LRRC57Q8N9N7 239 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 ZNF564Q8TBZ8 553 aaPredicted RBP13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 OSCP1Q8WVF1 389 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 ATP2A3Q93084 1043 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 CAPZA3Q96KX2 299 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 PLA2G2FQ9BZM2 168 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 LTB4R2Q9NPC1 389 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TRPV5Q9NQA5 729 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 GKN1Q9NS71 199 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 DDIT4Q9NX09 232 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 DUS2Q9NX74 493 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 CNOT8Q9UFF9 292 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TMEM59LQ9UK28 342 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 FBXO4Q9UKT5 387 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 SMG5Q9UPR3 1016 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 TLR6Q9Y2C9 796 aa13.99□□□□□ -0.17
CSNK1D-220ENST00000581737 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 STC2O76061 302 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 NFATC1O95644 943 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 F9P00740 461 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 IGLV3-25P01717 112 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 APOEP02649 317 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 HMBSP08397 361 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 TARSP26639 723 aaKnown RBP13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SDC4P31431 198 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SLC1A1P43005 524 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SULT1E1P49888 294 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SLC25A52Q3SY17 297 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 PLEKHA7Q6IQ23 1121 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 CPA6Q8N4T0 437 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 CSGALNACT1Q8TDX6 532 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SHDQ96IW2 340 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 LRRC3BQ96PB8 259 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 NPY6RQ99463 290 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 NUP85Q9BW27 656 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SALL4Q9UJQ4 1053 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 PCDHGA2Q9Y5H1 932 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 TICRRQ7Z2Z1 1910 aa13.98□□□□□ -0.17
CSNK1D-220ENST00000581737 GOLGA6L10A0A0M3HER8 536 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 TCRBV5S1A1TA0A578 114 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 TARSL2A2RTX5 802 aaKnown RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CCDC66A2RUB6 948 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 C2CD4BA6NLJ0 364 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CCDC188H7C350 402 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 M0QYT0 321 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 PGRMC1O00264 195 aaKnown RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 KCNK3O14649 394 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 MSI1O43347 362 aaKnown RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 SPOPO43791 374 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 BUB1BO60566 1050 aaPredicted RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 IGLV3-27P01718 113 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 PDGFRAP16234 1089 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 GPD1P21695 349 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CORO1AP31146 461 aaKnown RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CCR1P32246 355 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 FLT3P36888 993 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CETN2P41208 172 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 PTPN9P43378 593 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 SLC11A2P49281 568 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 ZXDBP98169 803 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 PRKCQQ04759 706 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 NR1H3Q13133 447 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 MAMLD1Q13495 774 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 BRD3Q15059 726 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 GLE1Q53GS7 698 aaKnown RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 SEL1L2Q5TEA6 688 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 RIN3Q8TB24 985 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 RXFP2Q8WXD0 754 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 NT5C3BQ969T7 300 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CLDN23Q96B33 292 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 PGAP3Q96FM1 320 aaPredicted RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 MSANTD3Q96H12 275 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 MCEEQ96PE7 176 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 DDX50Q9BQ39 737 aaKnown RBP13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 FAM83CQ9BQN1 747 aa13.97□□□□□ -0.17
CSNK1D-220ENST00000581737 CARD9Q9H257 536 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms