RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 B3GALNT2Q8NCR0 500 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 NT5C1BQ96P26 610 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 NIF3L1Q9GZT8 377 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 OSER1Q9NX31 292 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 THAP10Q9P2Z0 257 aaPredicted RBP20.26■□□□□ 0.83
LIMD2-209ENST00000580222 LRRC10BA6NIK2 292 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 E9PAM4 449 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 TLR5O60602 858 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 GRK6P43250 576 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 AFF3P51826 1226 aaKnown RBP20.25■□□□□ 0.83
LIMD2-209ENST00000580222 CFHR1Q03591 330 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 UBXN1Q04323 297 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 EHBP1Q8NDI1 1231 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 ZMIZ2Q8NF64 920 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 NUP58Q9BVL2 599 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 APOBEC3GQ9HC16 384 aaKnown RBP20.25■□□□□ 0.83
LIMD2-209ENST00000580222 TM9SF3Q9HD45 589 aa20.25■□□□□ 0.83
LIMD2-209ENST00000580222 MDM4O15151 490 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 PCDHGA12O60330 932 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 BEST1O76090 585 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 PRKCHP24723 683 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 OXTRP30559 389 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 ACSL1P33121 698 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 STARD3Q14849 445 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 PRAMEF14Q5SWL7 426 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 FAM35AQ86V20 835 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 SORCS1Q8WY21 1168 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 SNX19Q92543 992 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 NACA2Q9H009 215 aa20.24■□□□□ 0.83
LIMD2-209ENST00000580222 KNTC1P50748 2209 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 A0A1B0GTH6 734 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 A8MXQ7 604 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 JUPP14923 745 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 SLC9A1P19634 815 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 MFAP3P55082 362 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 CDH8P55286 799 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 UBASH3AP57075 661 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 TARDBPQ13148 414 aaKnown RBP eCLIP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 DNAJC3Q13217 504 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 TRIM65Q6PJ69 517 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 Q6ZNB5 142 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 LRRC69Q6ZNQ3 347 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 RBBP8NLQ8NC74 664 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 LMO3Q8TAP4 145 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 PRCCQ92733 491 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 NXPE2Q96DL1 559 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 PCMTD1Q96MG8 357 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 SMYD3Q9H7B4 428 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 DNMT3LQ9UJW3 386 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 NUDT5Q9UKK9 219 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 CLEC4EQ9ULY5 219 aa20.23■□□□□ 0.83
LIMD2-209ENST00000580222 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 MUC22E2RYF6 1773 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-209ENST00000580222 CTSKP43235 329 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 ASPAP45381 313 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 ZNF234Q14588 700 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 GPR155Q7Z3F1 870 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 GATAD2AQ86YP4 633 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 PPM1KQ8N3J5 372 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 TATDN2Q93075 761 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 IGSF8Q969P0 613 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 NAP1L5Q96NT1 182 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-209ENST00000580222 SMOQ99835 787 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 ORAI3Q9BRQ5 295 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 IFNKQ9P0W0 207 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 SLC27A6Q9Y2P4 619 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 AK5Q9Y6K8 562 aa20.22■□□□□ 0.83
LIMD2-209ENST00000580222 TEX33O43247 280 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 CBFA2T2O43439 604 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 KLKB1P03952 638 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 TPM3P06753 285 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 FAM163BP0C2L3 166 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 TBXAS1P24557 533 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-209ENST00000580222 PON1P27169 355 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 CCT8P50990 548 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 KCNMA1Q12791 1236 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 CUL2Q13617 745 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 SYCP1Q15431 976 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 FYB2Q5VWT5 728 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 TMEM215Q68D42 235 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 FUKQ8N0W3 1084 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 FAXDC2Q96IV6 333 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 SEMA4CQ9C0C4 833 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 NMUR1Q9HB89 426 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 FTSJ1Q9UET6 329 aa20.21■□□□□ 0.83
LIMD2-209ENST00000580222 SYNCRIPO60506 623 aaKnown RBP20.2■□□□□ 0.82
LIMD2-209ENST00000580222 PENKP01210 267 aaPredicted RBP20.2■□□□□ 0.82
LIMD2-209ENST00000580222 TLE3Q04726 772 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 RTP5Q14D33 572 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 GPRIN1Q7Z2K8 1008 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 SNIP1Q8TAD8 396 aaKnown RBP20.2■□□□□ 0.82
LIMD2-209ENST00000580222 BIRC7Q96CA5 298 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 PIWIL1Q96J94 861 aaKnown RBP20.2■□□□□ 0.82
LIMD2-209ENST00000580222 ERGIC2Q96RQ1 377 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 MED10Q9BTT4 135 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 SDCBP2Q9H190 292 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 CYP3A43Q9HB55 503 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 DMAP1Q9NPF5 467 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms