RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CCT8P50990 548 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 RPS14P62263 151 aaKnown RBP18.62■□□□□ 0.57
MKS1-209ENST00000580127 KIF19Q2TAC6 998 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 LCLAT1Q6UWP7 414 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 USP30Q70CQ3 517 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 KIAA0907Q7Z7F0 614 aaPredicted RBP18.62■□□□□ 0.57
MKS1-209ENST00000580127 BIRC7Q96CA5 298 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 METTL14Q9HCE5 456 aaKnown RBP18.62■□□□□ 0.57
MKS1-209ENST00000580127 TM9SF3Q9HD45 589 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 HOOK1Q9UJC3 728 aaKnown RBP18.62■□□□□ 0.57
MKS1-209ENST00000580127 GPSM3Q9Y4H4 160 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 SNX11Q9Y5W9 270 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 DMXL2Q8TDJ6 3036 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 ADAMTS20P59510 1910 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 GOLGA6L4A6NEF3 574 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 GOLGA8CPA6NN73 597 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 TULP2O00295 520 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 FBXO21O94952 628 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 SMC2O95347 1197 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 MOCS3O95396 460 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 ATXN1LP0C7T5 689 aaKnown RBP18.61■□□□□ 0.57
MKS1-209ENST00000580127 BNC1Q01954 994 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 PIK3R6Q5UE93 754 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 MSANTD2Q6P1R3 559 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 HJURPQ8NCD3 748 aaPredicted RBP18.61■□□□□ 0.57
MKS1-209ENST00000580127 GSDMAQ96QA5 445 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 ACE2Q9BYF1 805 aaPredicted RBP18.61■□□□□ 0.57
MKS1-209ENST00000580127 DKK4Q9UBT3 224 aa18.61■□□□□ 0.57
MKS1-209ENST00000580127 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.61■□□□□ 0.57
MKS1-209ENST00000580127 KNTC1P50748 2209 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 O00370 1275 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 ACSL4O60488 711 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 CDK4P11802 303 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 TBX4P57082 545 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 DAOAP59103 153 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 RACK1P63244 317 aaKnown RBP18.6■□□□□ 0.57
MKS1-209ENST00000580127 NUCB2P80303 420 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 STIM1Q13586 685 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 NUMA1Q14980 2115 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 CNGA2Q16280 664 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 ZNF658Q5TYW1 1059 aaPredicted RBP18.6■□□□□ 0.57
MKS1-209ENST00000580127 C19orf48Q6RUI8 117 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 MFN1Q8IWA4 741 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 ZNF366Q8N895 744 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 FIBINQ8TAL6 211 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 BAHD1Q8TBE0 780 aaPredicted RBP18.6■□□□□ 0.57
MKS1-209ENST00000580127 HSFY1Q96LI6 401 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 TRIM62Q9BVG3 475 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 TPX2Q9ULW0 747 aaKnown RBP18.6■□□□□ 0.57
MKS1-209ENST00000580127 PTPRBP23467 1997 aa18.6■□□□□ 0.57
MKS1-209ENST00000580127 PLXNB3Q9ULL4 1909 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 LRRC72A6NJI9 287 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 SART1O43290 800 aaKnown RBP18.59■□□□□ 0.57
MKS1-209ENST00000580127 LTFP02788 710 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 PRCPP42785 496 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 LRMPQ12912 555 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 PTPRNQ16849 979 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 CBWD6Q4V339 395 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 CBWD3Q5JTY5 395 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 CBWD5Q5RIA9 395 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 KIAA0895LQ68EN5 471 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 RFWD3Q6PCD5 774 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 TMEM270Q6UE05 265 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 BHLHA9Q7RTU4 235 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 SMYD4Q8IYR2 804 aaPredicted RBP18.59■□□□□ 0.57
MKS1-209ENST00000580127 PDCD7Q8N8D1 485 aaKnown RBP18.59■□□□□ 0.57
MKS1-209ENST00000580127 KDM1BQ8NB78 822 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 SLC35F5Q8WV83 523 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 TTC17Q96AE7 1141 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 NT5C1BQ96P26 610 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 OMDQ99983 421 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 RSPH9Q9H1X1 276 aaPredicted RBP18.59■□□□□ 0.57
MKS1-209ENST00000580127 FBXL12Q9NXK8 326 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 STIM2Q9P246 746 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 PCDHB4Q9Y5E5 795 aa18.59■□□□□ 0.57
MKS1-209ENST00000580127 URB1O60287 2271 aaKnown RBP18.59■□□□□ 0.57
MKS1-209ENST00000580127 TARSL2A2RTX5 802 aaKnown RBP18.58■□□□□ 0.56
MKS1-209ENST00000580127 FAM47DPA6NHR8 397 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 E9PAM4 449 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 MSI1O43347 362 aaKnown RBP18.58■□□□□ 0.56
MKS1-209ENST00000580127 NNMTP40261 264 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 COBLL1Q53SF7 1204 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 SLC45A4Q5BKX6 768 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 RNF219Q5W0B1 726 aaPredicted RBP18.58■□□□□ 0.56
MKS1-209ENST00000580127 ANKRD40Q6AI12 368 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 PDZD3Q86UT5 571 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 MDM1Q8TC05 714 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 PABPC3Q9H361 631 aaKnown RBP18.58■□□□□ 0.56
MKS1-209ENST00000580127 SCUBE2Q9NQ36 999 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 FTSJ1Q9UET6 329 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 CEP83Q9Y592 693 aa18.58■□□□□ 0.56
MKS1-209ENST00000580127 TRABD2BA6NFA1 517 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 EIF4E1BA6NMX2 242 aaKnown RBP18.57■□□□□ 0.56
MKS1-209ENST00000580127 VILLO15195 856 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 YKT6O15498 198 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 DKK1O94907 266 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 IGLV3-27P01718 113 aa18.57■□□□□ 0.56
MKS1-209ENST00000580127 SRPRAP08240 638 aaKnown RBP18.57■□□□□ 0.56
MKS1-209ENST00000580127 HOXB3P14651 431 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms