RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GPR149Q86SP6 731 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 SLC35F6Q8N357 371 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 DQX1Q8TE96 717 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 FAM172AQ8WUF8 416 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 MRPS31Q92665 395 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 SLC39A13Q96H72 371 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 SERPINB11Q96P15 392 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 WDR24Q96S15 920 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TBCBQ99426 244 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TLR10Q9BXR5 811 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 ZNF334Q9HCZ1 680 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.32□□□□□ -1.08
COPS3-215ENST00000578317 KCNMB2Q9Y691 235 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 MYO7AQ13402 2215 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 COL6A3P12111 3177 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CTAGE9A4FU28 777 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CES2O00748 559 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 PSTPIP1O43586 416 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 SPOPO43791 374 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 RHOP08100 348 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 KRT7P08729 469 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 SLC2A3P11169 496 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TNNT1P13805 278 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 MIPP30301 263 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CTNNA1P35221 906 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
COPS3-215ENST00000578317 COG7P83436 770 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 ATP11AP98196 1134 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 ITIH3Q06033 890 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 PPP2R5DQ14738 602 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 RPS6KA1Q15418 735 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 C15orf59Q2T9L4 293 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 BRMS1LQ5PSV4 323 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 ACBD5Q5T8D3 534 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 OTUD1Q5VV17 481 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 ANKRD54Q6NXT1 300 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 SYCE2Q6PIF2 218 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 RHOT1Q8IXI2 618 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TEKT4Q8WW24 435 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 AZIN2Q96A70 460 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 NTAN1Q96AB6 310 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 PABPC5Q96DU9 382 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 C16orf45Q96MC5 204 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 CORO1BQ9BR76 489 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 S1PR5Q9H228 398 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 ADAM7Q9H2U9 754 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 GOLPH3Q9H4A6 298 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 IGFLR1Q9H665 355 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CAPN10Q9HC96 672 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 WDR6Q9NNW5 1121 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 TIMMDC1Q9NPL8 285 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 CALCOCO1Q9P1Z2 691 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 USP18Q9UMW8 372 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
COPS3-215ENST00000578317 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.32□□□□□ -1.08
COPS3-215ENST00000578317 HBS1LQ9Y450 684 aaKnown RBP8.32□□□□□ -1.08
COPS3-215ENST00000578317 NLRC5Q86WI3 1866 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 PLXNA4Q9HCM2 1894 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 KCNU1A8MYU2 1149 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 MDM4O15151 490 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 FANCGO15287 622 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 IRAK2O43187 625 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 COCHO43405 550 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 PRPSAP2O60256 369 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 MOSPD3O75425 235 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 TBX18O95935 607 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 FTCDO95954 541 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 IGLV3-27P01718 113 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 MSX1P28360 303 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 CASQ1P31415 396 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 CCR1P32246 355 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 ADRA1BP35368 520 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 CCR2P41597 374 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 SULT1E1P49888 294 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 PITX1P78337 314 aaPredicted RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 SLC7A9P82251 487 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 RBM10P98175 930 aaKnown RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 SLC25A11Q02978 314 aaKnown RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 DEUP1Q05D60 604 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 SCAPQ12770 1279 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 TUBB2AQ13885 445 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 C10orf120Q5SQS8 335 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 ERMARDQ5T6L9 678 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 TMC5Q6UXY8 1006 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 SYT10Q6XYQ8 523 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 CYP4V2Q6ZWL3 525 aaPredicted RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 PDZD4Q76G19 769 aaPredicted RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 RSRC2Q7L4I2 434 aaKnown RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 GRASPQ7Z6J2 395 aaPredicted RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 TAC4Q86UU9 113 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 VSIG1Q86XK7 387 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 UBL4BQ8N7F7 174 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 KIAA1958Q8N8K9 716 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 KIF18AQ8NI77 898 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 SHKBP1Q8TBC3 707 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 FAM71BQ8TC56 605 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms