RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 I6L893 689 aaPredicted RBP20■□□□□ 0.79
SS18-208ENST00000577751 DDX3XO00571 662 aaKnown RBP eCLIP20■□□□□ 0.79
SS18-208ENST00000577751 GJB6O95452 261 aa20■□□□□ 0.79
SS18-208ENST00000577751 ADCY5O95622 1261 aa20■□□□□ 0.79
SS18-208ENST00000577751 RFC1P35251 1148 aaPredicted RBP20■□□□□ 0.79
SS18-208ENST00000577751 PTPN9P43378 593 aa20■□□□□ 0.79
SS18-208ENST00000577751 EIF4HQ15056 248 aaKnown RBP20■□□□□ 0.79
SS18-208ENST00000577751 CCDC14Q49A88 953 aa20■□□□□ 0.79
SS18-208ENST00000577751 PPP1R15BQ5SWA1 713 aa20■□□□□ 0.79
SS18-208ENST00000577751 TMEM215Q68D42 235 aa20■□□□□ 0.79
SS18-208ENST00000577751 SPECC1LQ69YQ0 1117 aa20■□□□□ 0.79
SS18-208ENST00000577751 TMEM92Q6UXU6 159 aa20■□□□□ 0.79
SS18-208ENST00000577751 SND1Q7KZF4 910 aaKnown RBP eCLIP20■□□□□ 0.79
SS18-208ENST00000577751 TRMT11Q7Z4G4 463 aaKnown RBP20■□□□□ 0.79
SS18-208ENST00000577751 WDR5BQ86VZ2 330 aa20■□□□□ 0.79
SS18-208ENST00000577751 CHSY1Q86X52 802 aa20■□□□□ 0.79
SS18-208ENST00000577751 LGI2Q8N0V4 545 aa20■□□□□ 0.79
SS18-208ENST00000577751 ZNF557Q8N988 423 aaPredicted RBP20■□□□□ 0.79
SS18-208ENST00000577751 FIBINQ8TAL6 211 aa20■□□□□ 0.79
SS18-208ENST00000577751 WFDC5Q8TCV5 224 aa20■□□□□ 0.79
SS18-208ENST00000577751 RXFP2Q8WXD0 754 aa20■□□□□ 0.79
SS18-208ENST00000577751 LMLNQ96KR4 655 aa20■□□□□ 0.79
SS18-208ENST00000577751 SELENOOQ9BVL4 669 aa20■□□□□ 0.79
SS18-208ENST00000577751 TKTL2Q9H0I9 626 aa20■□□□□ 0.79
SS18-208ENST00000577751 ELOVL2Q9NXB9 296 aa20■□□□□ 0.79
SS18-208ENST00000577751 EBF1Q9UH73 591 aa20■□□□□ 0.79
SS18-208ENST00000577751 PAXBP1Q9Y5B6 917 aa20■□□□□ 0.79
SS18-208ENST00000577751 EML5Q05BV3 1969 aa20■□□□□ 0.79
SS18-208ENST00000577751 TYW5A2RUC4 315 aaKnown RBP19.99■□□□□ 0.79
SS18-208ENST00000577751 F5H5T6 163 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 TIMM44O43615 452 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 PAGE1O75459 146 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 PDGFRAP16234 1089 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 NTSR1P30989 418 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 CASP14P31944 242 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 RDXP35241 583 aaKnown RBP19.99■□□□□ 0.79
SS18-208ENST00000577751 ATXN1P54253 815 aaKnown RBP19.99■□□□□ 0.79
SS18-208ENST00000577751 C5orf22Q49AR2 442 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 FBXL22Q6P050 247 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 WDR59Q6PJI9 974 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 CFAP52Q8N1V2 620 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 CENPIQ92674 756 aaPredicted RBP19.99■□□□□ 0.79
SS18-208ENST00000577751 HHIPQ96QV1 700 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 ACOX2Q99424 681 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 STIM2Q9P246 746 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 HS3ST4Q9Y661 456 aa19.99■□□□□ 0.79
SS18-208ENST00000577751 NPC1O15118 1278 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 APBB3O95704 486 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 SERPING1P05155 500 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 RRM1P23921 792 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 SDC4P31431 198 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 HNRNPH3P31942 346 aaKnown RBP19.98■□□□□ 0.79
SS18-208ENST00000577751 CNR2P34972 360 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 PXNP49023 591 aaPredicted RBP19.98■□□□□ 0.79
SS18-208ENST00000577751 DGKEP52429 567 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 ENPP2Q13822 863 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 AUHQ13825 339 aaKnown RBP19.98■□□□□ 0.79
SS18-208ENST00000577751 HEATR6Q6AI08 1181 aaKnown RBP19.98■□□□□ 0.79
SS18-208ENST00000577751 SARM1Q6SZW1 724 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 STRADAQ7RTN6 431 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 ADIPOR2Q86V24 386 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 VSTM4Q8IW00 320 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 MFN1Q8IWA4 741 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 WFIKKN2Q8TEU8 576 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 NKD2Q969F2 451 aaPredicted RBP19.98■□□□□ 0.79
SS18-208ENST00000577751 C1orf74Q96LT6 269 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 GABRG3Q99928 467 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 ABCB8Q9NUT2 735 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 THAP10Q9P2Z0 257 aaPredicted RBP19.98■□□□□ 0.79
SS18-208ENST00000577751 GGA2Q9UJY4 613 aa19.98■□□□□ 0.79
SS18-208ENST00000577751 VPS13AQ96RL7 3174 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 TMCO5BA8MYB1 307 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 AP5Z1O43299 807 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 HRO43593 1189 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 RTN2O75298 545 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 LUC7L3O95232 432 aaKnown RBP19.97■□□□□ 0.79
SS18-208ENST00000577751 FTLP02792 175 aaPredicted RBP19.97■□□□□ 0.79
SS18-208ENST00000577751 PABPC1P11940 636 aaKnown RBP19.97■□□□□ 0.79
SS18-208ENST00000577751 CD70P32970 193 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 ATP11AP98196 1134 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 TRIM14Q14142 442 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 ARID5BQ14865 1188 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 C15orf59Q2T9L4 293 aaPredicted RBP19.97■□□□□ 0.79
SS18-208ENST00000577751 ACBD5Q5T8D3 534 aaPredicted RBP19.97■□□□□ 0.79
SS18-208ENST00000577751 SH3PXD2AQ5TCZ1 1133 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 TTC39BQ5VTQ0 682 aaPredicted RBP19.97■□□□□ 0.79
SS18-208ENST00000577751 DNAJC24Q6P3W2 148 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 RASSF3Q86WH2 238 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 CHPFQ8IZ52 775 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 AHI1Q8N157 1196 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 SUMF1Q8NBK3 374 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 TSTD1Q8NFU3 115 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 UCMAQ8WVF2 138 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 IGSF8Q969P0 613 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 HAPLN3Q96S86 360 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 ISCUQ9H1K1 167 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 EPC1Q9H2F5 836 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 CD248Q9HCU0 757 aa19.97■□□□□ 0.79
SS18-208ENST00000577751 A0A1W2PQF6 199 aa19.96■□□□□ 0.79
SS18-208ENST00000577751 GPD1P21695 349 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms