RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 SIN3BO75182 1162 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 ARRB1P49407 418 aaPredicted RBP12.14□□□□□ -0.47
SNRPN-208ENST00000577565 PPP2CBP62714 309 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 PPP2CAP67775 309 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 GABREP78334 506 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 DLG4P78352 724 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 INCA1Q0VD86 236 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 TRIP4Q15650 581 aaPredicted RBP12.14□□□□□ -0.47
SNRPN-208ENST00000577565 MPPE1Q53F39 396 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 BROXQ5VW32 411 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 CCDC73Q6ZRK6 1079 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 STXBP4Q6ZWJ1 553 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 BHLHA9Q7RTU4 235 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 TADA2BQ86TJ2 420 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 AADATQ8N5Z0 425 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 OR2T34Q8NGX1 318 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 KCNE4Q8WWG9 221 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 LMLNQ96KR4 655 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 MRGPRX3Q96LB0 322 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 ERVMER34-1Q9H9K5 563 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 DOPEY2Q9Y3R5 2298 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
SNRPN-208ENST00000577565 CLSTN1O94985 981 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 GIMD1P0DJR0 217 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 CCR5P51681 352 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 SKOR1P84550 965 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 CST6Q15828 149 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 COLEC12Q5KU26 742 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 FAM26FQ5R3K3 315 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 PRICKLE2Q7Z3G6 844 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 C12orf56Q8IXR9 622 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 SLC25A45Q8N413 288 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 PDILTQ8N807 584 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 GANCQ8TET4 914 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 NDRG1Q92597 394 aaKnown RBP12.13□□□□□ -0.47
SNRPN-208ENST00000577565 SKA1Q96BD8 255 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 VCPIP1Q96JH7 1222 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 SERAC1Q96JX3 654 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 CDK5RAP1Q96SZ6 601 aaKnown RBP12.13□□□□□ -0.47
SNRPN-208ENST00000577565 IL17BQ9UHF5 180 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 STOML2Q9UJZ1 356 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 INTS6Q9UL03 887 aaKnown RBP12.13□□□□□ -0.47
SNRPN-208ENST00000577565 NCKAP1Q9Y2A7 1128 aa12.13□□□□□ -0.47
SNRPN-208ENST00000577565 NYNRINQ9P2P1 1898 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 K7ENP7 123 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 TERTO14746 1132 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 LATO43561 262 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 OPA1O60313 960 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 USP12O75317 370 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 RNASEH2AO75792 299 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 ASS1P00966 412 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 MYF5P13349 255 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 TXLNAP40222 546 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 LSSP48449 732 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 ADPRHP54922 357 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 ERVPABLB-1P60509 514 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 E2F4Q16254 413 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 ZACNQ401N2 412 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 C1orf220Q5T0J3 134 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 C9orf64Q5T6V5 341 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 PPP1R26Q5T8A7 1209 aaPredicted RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 INO80CQ6PI98 192 aaPredicted RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 PLD4Q96BZ4 506 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 FAM129BQ96TA1 746 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
SNRPN-208ENST00000577565 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 UCKL1Q9NWZ5 548 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 ARHGAP20Q9P2F6 1191 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 SUN2Q9UH99 717 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 FZD4Q9ULV1 537 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 SCML1Q9UN30 329 aa12.12□□□□□ -0.47
SNRPN-208ENST00000577565 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 LY6G6EA0A0G2JKS1 128 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 A0A1B0GVM2 712 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 LRRC72A6NJI9 287 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 STX6O43752 255 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 EXOC3O60645 756 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
SNRPN-208ENST00000577565 KIF20AO95235 890 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 SLC8A1P32418 973 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 METAP1P53582 386 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRPN-208ENST00000577565 NFKB2Q00653 900 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 E2F1Q01094 437 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
SNRPN-208ENST00000577565 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 OXR1Q8N573 874 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 MFSD2AQ8NA29 543 aa12.11□□□□□ -0.47
SNRPN-208ENST00000577565 TTC17Q96AE7 1141 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms