RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SRP68Q9UHB9 627 aaKnown RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 SLC13A4Q9UKG4 626 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 DAPP1Q9UN19 280 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 SLC12A4Q9UP95 1085 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 DERAQ9Y315 318 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 RRP7AQ9Y3A4 280 aaKnown RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 HEMK1Q9Y5R4 338 aaPredicted RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 EMSYQ7Z589 1322 aa2.84□□□□□ -1.96
COPS3-213ENST00000577210 TCRBV5S1A1TA0A578 114 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 SLC38A8A6NNN8 435 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 KIF28PB7ZC32 967 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 PRRT4C9JH25 899 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 SMIM22K7EJ46 135 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 PIP5K1CO60331 668 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 PRAMEF2O60811 474 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 LCKP06239 509 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 VEGFAP15692 232 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 XBP1P17861 261 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 TFEBP19484 476 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 NDUFS1P28331 727 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 ARL1P40616 181 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 PNPLA4P41247 253 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 KCNJ4P48050 445 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 VPS41P49754 854 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 RCAN1P53805 252 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 RPL15P61313 204 aaKnown RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 VAMP2P63027 116 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 TLE2Q04725 743 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 RNASELQ05823 741 aaKnown RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 TBL3Q12788 808 aaKnown RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 ALKBH1Q13686 389 aaKnown RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 DCTN1Q14203 1278 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 ZNF268Q14587 947 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 RALBP1Q15311 655 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 PROSER3Q2NL68 480 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 BTBD16Q32M84 506 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 TUBB8Q3ZCM7 444 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 ANXA2RQ3ZCQ2 193 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 ALFQ53S48 1182 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 JMJD6Q6NYC1 403 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 MIS18BP1Q6P0N0 1132 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 AMIGO2Q86SJ2 522 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 GPR150Q8NGU9 434 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 SCAMP5Q8TAC9 235 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 OSR1Q8TAX0 266 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 ZNF398Q8TD17 642 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 AFG1LQ8WV93 481 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 PIGKQ92643 395 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 CLMNQ96JQ2 1002 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 NAP1L4Q99733 375 aaKnown RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 ASNSD1Q9NWL6 643 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 ASIC5Q9NY37 505 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 C11orf21Q9P2W6 132 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 TRPC5Q9UL62 973 aaPredicted RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 ASAP1Q9ULH1 1129 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 VPS4AQ9UN37 437 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 SCAF8Q9UPN6 1271 aaKnown RBP2.83□□□□□ -1.96
COPS3-213ENST00000577210 SLC8A2Q9UPR5 921 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 PCDHB2Q9Y5E7 798 aa2.83□□□□□ -1.96
COPS3-213ENST00000577210 MGST3O14880 152 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 INPPL1O15357 1258 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 PRPF4O43172 522 aaKnown RBP eCLIP2.82□□□□□ -1.96
COPS3-213ENST00000577210 ANP32CO43423 234 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 ALADP13716 330 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 GYS1P13807 737 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 HOXB9P17482 250 aaPredicted RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 RPS6KB1P23443 525 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 DDIT3P35638 169 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 GPD2P43304 727 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 AGTR2P50052 363 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 RPS6KA3P51812 740 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 TAS2R50P59544 299 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 RPS13P62277 151 aaKnown RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 GHRHRQ02643 423 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 COL10A1Q03692 680 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 UBE3AQ05086 875 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 POU5F1BQ06416 359 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 FOXD4Q12950 439 aaPredicted RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 THOC5Q13769 683 aaKnown RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 ZNF362Q5T0B9 420 aaPredicted RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 ISM2Q6H9L7 571 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 LIN54Q6MZP7 749 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 DENND1BQ6P3S1 775 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 CYP26C1Q6V0L0 522 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 KYAT3Q6YP21 454 aaKnown RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 ZNF788Q6ZQV5 615 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 MOGAT3Q86VF5 341 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 CHSY1Q86X52 802 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 DNAJC10Q8IXB1 793 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 GALNT16Q8N428 558 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 PAF1Q8N7H5 531 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 FAM98AQ8NCA5 519 aaKnown RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 KTI12Q96EK9 354 aaPredicted RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 KAZALD1Q96I82 304 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 RITA1Q96K30 269 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 PPP1R10Q96QC0 940 aaKnown RBP2.82□□□□□ -1.96
COPS3-213ENST00000577210 CRAMP1Q96RY5 1269 aa2.82□□□□□ -1.96
COPS3-213ENST00000577210 ABHD14AQ9BUJ0 271 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms