RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 DQX1Q8TE96 717 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 PDCD6IPQ8WUM4 868 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 ATP6V1E2Q96A05 226 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 COX4I2Q96KJ9 171 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 SIGLEC10Q96LC7 697 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 PEBP4Q96S96 227 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 EBNA1BP2Q99848 306 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 SLC4A5Q9BY07 1137 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 PIH1D1Q9NWS0 290 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 COPG2Q9UBF2 871 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 PRPF19Q9UMS4 504 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 COQ6Q9Y2Z9 468 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 PLOD2O00469 737 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 IDO1P14902 403 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 ZNF24P17028 368 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 TCF7P36402 384 aaPredicted RBP14.79□□□□□ -0.04
SMG6-215ENST00000574501 CLCN2P51788 898 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 PDCD4Q53EL6 469 aaKnown RBP14.79□□□□□ -0.04
SMG6-215ENST00000574501 RC3H1Q5TC82 1133 aaKnown RBP14.79□□□□□ -0.04
SMG6-215ENST00000574501 IMPG2Q9BZV3 1241 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 FAM96AQ9H5X1 160 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 XPNPEP3Q9NQH7 507 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 CISHQ9NSE2 258 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 OLAHQ9NV23 265 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 SLC38A7Q9NVC3 462 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 MYRFQ9Y2G1 1151 aa14.79□□□□□ -0.04
SMG6-215ENST00000574501 FUOMA2VDF0 154 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 H3BNH8 94 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 ENTPD3O75355 529 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 BBOX1O75936 387 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 TRUB2O95900 331 aaKnown RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 MYCLP12524 364 aaPredicted RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 GRK2P25098 689 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 OGFOD2Q6N063 350 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 CASC4Q6P4E1 433 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 TIFABQ6ZNK6 161 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 ATP2A3Q93084 1043 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 C12orf43Q96C57 262 aaKnown RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 ISOC1Q96CN7 298 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 VPS50Q96JG6 964 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 SDCBP2Q9H190 292 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 RSAD1Q9HA92 442 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 ANKEF1Q9NU02 776 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 CDC14AQ9UNH5 594 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 G3V3G9 751 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 ADAM23O75077 832 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 HSPA4LO95757 839 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 ZBED1O96006 694 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 HARS2P49590 506 aaKnown RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 CRY2Q49AN0 593 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 NAPRTQ6XQN6 538 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 ZNF534Q76KX8 674 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 ZBTB46Q86UZ6 589 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 RMND5BQ96G75 393 aaPredicted RBP14.78□□□□□ -0.04
SMG6-215ENST00000574501 MARK4Q96L34 752 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 CDH19Q9H159 772 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 TCF7L2Q9NQB0 619 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 TBC1D23Q9NUY8 699 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 PCDHA11Q9Y5I1 949 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 PSAT1Q9Y617 370 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 CROCCQ5TZA2 2017 aa14.78□□□□□ -0.04
SMG6-215ENST00000574501 RGSL1A5PLK6 1076 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 HTR3EA5X5Y0 456 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 PSMD12O00232 456 aaPredicted RBP14.77□□□□□ -0.04
SMG6-215ENST00000574501 METTL18O95568 372 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 F7P08709 466 aaPredicted RBP14.77□□□□□ -0.04
SMG6-215ENST00000574501 OCM2P0CE71 109 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 OCMP0CE72 109 aaPredicted RBP14.77□□□□□ -0.04
SMG6-215ENST00000574501 CD19P15391 556 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 ME2P23368 584 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 ORC1Q13415 861 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 CCDC92Q53HC0 331 aaPredicted RBP14.77□□□□□ -0.04
SMG6-215ENST00000574501 SLC9A4Q6AI14 798 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 TMEM53Q6P2H8 277 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 LRTOMTQ8WZ04 291 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 ERLEC1Q96DZ1 483 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 CPXM1Q96SM3 734 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 ACO2Q99798 780 aaKnown RBP14.77□□□□□ -0.04
SMG6-215ENST00000574501 FERMT1Q9BQL6 677 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 IGSF9Q9P2J2 1179 aa14.77□□□□□ -0.04
SMG6-215ENST00000574501 WDR27A2RRH5 827 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 E2F6O75461 281 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 FUCA1P04066 466 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 MYL6P60660 151 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 PRAMEP78395 509 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 TXNL4AP83876 142 aaKnown RBP14.77□□□□□ -0.05
SMG6-215ENST00000574501 SP4Q02446 784 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 ATP1A4Q13733 1029 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 STXBP5Q5T5C0 1151 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 XKR5Q6UX68 686 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 GPR141Q7Z602 305 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 GPR180Q86V85 440 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 CARM1Q86X55 608 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 TMA16Q96EY4 203 aaKnown RBP14.77□□□□□ -0.05
SMG6-215ENST00000574501 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.05
SMG6-215ENST00000574501 PPP1R10Q96QC0 940 aaKnown RBP14.77□□□□□ -0.05
SMG6-215ENST00000574501 SLC29A1Q99808 456 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms