RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SIPA1Q96FS4 1042 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 MRGPRX1Q96LB2 322 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 DDX50Q9BQ39 737 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 TRIM62Q9BVG3 475 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 GTPBP2Q9BX10 602 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 TMEM74BQ9NUR3 256 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 ABCB8Q9NUT2 735 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 STIM2Q9P246 746 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 APEX2Q9UBZ4 518 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 EVLQ9UI08 416 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 GGA2Q9UJY4 613 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 PLA2G4CQ9UP65 541 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 PCDH15Q96QU1 1955 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 NUMA1Q14980 2115 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 TMEM131Q92545 1883 aa10.04□□□□□ -0.8
NPLOC4-216ENST00000574344 SYNJ2BP-COX16A0A087WUM0 186 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 E5RJQ4 531 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 IRAK2O43187 625 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 GABBR2O75899 941 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 KCNK5O95279 499 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 PABPC1P11940 636 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 SKILP12757 684 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 ATP1A3P13637 1013 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 ENGP17813 658 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 POLR2EP19388 210 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 PRKCHP24723 683 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 CD6P30203 668 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 HLA-FP30511 346 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 HOXD12P35452 270 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 APBA1Q02410 837 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 GFPT1Q06210 699 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 RING1Q06587 406 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 CDH18Q13634 790 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 TRIM14Q14142 442 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 MAN2A1Q16706 1144 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 DUOXA1Q1HG43 343 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 HSP90AA4PQ58FG1 418 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 SYCP2LQ5T4T6 812 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 SPECC1LQ69YQ0 1117 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 TAC4Q86UU9 113 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 TMPRSS6Q8IU80 811 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 PASD1Q8IV76 773 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 VSTM4Q8IW00 320 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 CARNMT1Q8N4J0 409 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 ZNF366Q8N895 744 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 ZNF557Q8N988 423 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 CEP76Q8TAP6 659 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 ZNF606Q8WXB4 792 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 FOXJ1Q92949 421 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 LSM14BQ9BX40 385 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 MKRN2Q9H000 416 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 CD248Q9HCU0 757 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 ACP6Q9NPH0 428 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 STOML2Q9UJZ1 356 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 PILRBQ9UKJ0 227 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 PYCARDQ9ULZ3 195 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 CNTN6Q9UQ52 1028 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 NAALADL1Q9UQQ1 740 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 TLR6Q9Y2C9 796 aa10.03□□□□□ -0.8
NPLOC4-216ENST00000574344 PLXNA2O75051 1894 aa10.02□□□□□ -0.8
NPLOC4-216ENST00000574344 TIMM44O43615 452 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 IGLV3-27P01718 113 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 ATP5BP06576 529 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 GNSP15586 552 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 ZNF18P17022 549 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 SLC6A4P31645 630 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 PDCLQ13371 301 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 NNTQ13423 1086 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 MEA1Q16626 185 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 FAM133BQ5BKY9 247 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 WDR45BQ5MNZ6 344 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 N4BP2L1Q5TBK1 243 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 SH3PXD2AQ5TCZ1 1133 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 PIK3R6Q5UE93 754 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 TMEM215Q68D42 235 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 MBLAC2Q68D91 279 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 SLC23A3Q6PIS1 610 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 FAM124AQ86V42 546 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 CHSY1Q86X52 802 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 SLC41A1Q8IVJ1 513 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 WFDC5Q8TCV5 224 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 SNX19Q92543 992 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 TOE1Q96GM8 510 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 FCRL2Q96LA5 508 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 CNTNAP3BQ96NU0 1288 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 NOX5Q96PH1 765 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 MED15Q96RN5 788 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 GPR174Q9BXC1 333 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 CNTNAP3Q9BZ76 1288 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 MIR1-1HGQ9H1L0 117 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 PDCL3Q9H2J4 239 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 THAP9Q9H5L6 903 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 SYNCQ9H7C4 482 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 FAM204AQ9H8W3 233 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 POPDC2Q9HBU9 364 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.81
NPLOC4-216ENST00000574344 TJP2Q9UDY2 1190 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms