RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMIM28-201ENST00000573100 LGMNQ99538 433 aa12.8□□□□□ -0.36
SMIM28-201ENST00000573100 UBXN6Q9BZV1 441 aa12.8□□□□□ -0.36
SMIM28-201ENST00000573100 NEUROG2Q9H2A3 272 aa12.8□□□□□ -0.36
SMIM28-201ENST00000573100 MTG2Q9H4K7 406 aa12.8□□□□□ -0.36
SMIM28-201ENST00000573100 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
SMIM28-201ENST00000573100 A0A1W2PR77 199 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 WNT9AO14904 365 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 HLA-DRAP01903 254 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 CD58P19256 250 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 RXRGP48443 463 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 E2F1Q01094 437 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 KCNC4Q03721 635 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 KCNJ12Q14500 433 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 SLC45A4Q5BKX6 768 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 FMNL3Q8IVF7 1028 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
SMIM28-201ENST00000573100 DCBLD1Q8N8Z6 715 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 ZNF248Q8NDW4 579 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 OR2T34Q8NGX1 318 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 RFFLQ8WZ73 363 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 HEXIM2Q96MH2 286 aaKnown RBP12.79□□□□□ -0.36
SMIM28-201ENST00000573100 OMDQ99983 421 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 BLZF1Q9H2G9 400 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 CLMPQ9H6B4 373 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 ERVMER34-1Q9H9K5 563 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 SERGEFQ9UGK8 458 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 STOML2Q9UJZ1 356 aa12.79□□□□□ -0.36
SMIM28-201ENST00000573100 HBS1LQ9Y450 684 aaKnown RBP12.79□□□□□ -0.36
SMIM28-201ENST00000573100 MYLKQ15746 1914 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 A0A1W2PP55 124 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 B8ZZF3 427 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 RNASEH2AO75792 299 aaKnown RBP12.78□□□□□ -0.36
SMIM28-201ENST00000573100 ZBED1O96006 694 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 CASP1P29466 404 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 CD70P32970 193 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 CCR5P51681 352 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 UCNP55089 124 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 NXPH1P58417 271 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 ST8SIA6P61647 398 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 INSM1Q01101 510 aaPredicted RBP12.78□□□□□ -0.36
SMIM28-201ENST00000573100 STK38Q15208 465 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 SFMBT2Q5VUG0 894 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 BROXQ5VW32 411 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 PIGZQ86VD9 579 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 SLC9A9Q8IVB4 645 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 OXR1Q8N573 874 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 TMEM174Q8WUU8 243 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 NAF1Q96HR8 494 aaKnown RBP12.78□□□□□ -0.36
SMIM28-201ENST00000573100 SERAC1Q96JX3 654 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 BACH2Q9BYV9 841 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 OLA1Q9NTK5 396 aaKnown RBP12.78□□□□□ -0.36
SMIM28-201ENST00000573100 ADAMTS1Q9UHI8 967 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 FZD4Q9ULV1 537 aa12.78□□□□□ -0.36
SMIM28-201ENST00000573100 MID1O15344 667 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 SIN3BO75182 1162 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 MT-CO3P00414 261 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 SYT1P21579 422 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 ACP1P24666 158 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 SLC8A1P32418 973 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 TKTL1P51854 596 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 SLC8A3P57103 927 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 PCBP4P57723 403 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 TMPRSS3P57727 454 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 CST6Q15828 149 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 HNRNPA1L2Q32P51 320 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 ZNF394Q53GI3 561 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 MPP7Q5T2T1 576 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 ARHGAP40Q5TG30 622 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 PM20D1Q6GTS8 502 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 LSMEM2Q8N112 164 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 FAM181AQ8N9Y4 354 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 RNF139Q8WU17 664 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 NDRG1Q92597 394 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.37
SMIM28-201ENST00000573100 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.37
SMIM28-201ENST00000573100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.76□□□□□ -0.37
SMIM28-201ENST00000573100 SPTLC2O15270 562 aa12.76□□□□□ -0.37
SMIM28-201ENST00000573100 TBL1XO60907 577 aa12.76□□□□□ -0.37
SMIM28-201ENST00000573100 LATS1O95835 1130 aa12.76□□□□□ -0.37
SMIM28-201ENST00000573100 NR3C1P04150 777 aa12.76□□□□□ -0.37
SMIM28-201ENST00000573100 C6P13671 934 aa12.76□□□□□ -0.37
SMIM28-201ENST00000573100 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
SMIM28-201ENST00000573100 PROX2Q3B8N5 592 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms