RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FAM90A1Q86YD7 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 RHPN2Q8IUC4 686 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM181AQ8N9Y4 354 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SMARCC2Q8TAQ2 1214 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 IFI44Q8TCB0 444 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 DHX58Q96C10 678 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SAT2Q96F10 170 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 PERPQ96FX8 193 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 LPIN3Q9BQK8 851 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 HTATIP2Q9BUP3 242 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC12A9Q9BXP2 914 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 EPB41L1Q9H4G0 881 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 PCDHB16Q9NRJ7 776 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 IARS2Q9NSE4 1012 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 POLR3BQ9NW08 1133 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 BEX4Q9NWD9 120 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ZSCAN32Q9NX65 697 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 AMACRQ9UHK6 382 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CDH7Q9ULB5 785 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CLEC4AQ9UMR7 237 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 AGAP1Q9UPQ3 857 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SNX9Q9Y5X1 595 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 NFS1Q9Y697 457 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM205AQ6ZU69 1335 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CENPJQ9HC77 1338 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 TCRBV21S2A2A0A5A6 115 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TMCO5BA8MYB1 307 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC33A1O00400 549 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 CXCL11O14625 94 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SMAD6O43541 496 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 PPP6R2O75170 966 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 NPPAP01160 153 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 AHSGP02765 367 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC192P0DO97 292 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 DLATP10515 647 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 PRLRP16471 622 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GALP22466 123 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 KLRK1P26718 216 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 AVPR2P30518 371 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 MDH1P40925 334 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ABCG1P45844 678 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 VCPP55072 806 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 CDH15P55291 814 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SNU13P55769 128 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ADAM17P78536 824 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GOLGA8DPQ0D2H9 430 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GPM6BQ13491 265 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 DPYSQ14117 519 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GAMTQ14353 236 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GALNT3Q14435 633 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 CLPPQ16740 277 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 HADHQ16836 314 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ZNF484Q5JVG2 852 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 RIPPLY2Q5TAB7 128 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 PRAMEF9Q5VWM5 478 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 DGAT2L7PQ6IED9 249 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TTI2Q6NXR4 508 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 MFSD7Q6UXD7 560 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC36A4Q6YBV0 504 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TAS2R42Q7RTR8 314 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 UBE3DQ7Z6J8 389 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM83AQ86UY5 434 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 IRF2BP1Q8IU81 584 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TICAM1Q8IUC6 712 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 LINC00528Q8N1L1 170 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 MPP5Q8N3R9 675 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TMEM151AQ8N4L1 468 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 AADATQ8N5Z0 425 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ZNF366Q8N895 744 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GPR156Q8NFN8 814 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 NLGN2Q8NFZ4 835 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 NEK11Q8NG66 645 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 OR56A3Q8NH54 315 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TEKT4Q8WW24 435 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GAB3Q8WWW8 586 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 PGAM5Q96HS1 289 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TMX3Q96JJ7 454 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ADAD1Q96M93 576 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 DGAT2Q96PD7 388 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 FANCD2OSQ96PS1 177 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 PIP5K1AQ99755 562 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 MGME1Q9BQP7 344 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SYT17Q9BSW7 474 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 C1orf43Q9BWL3 253 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 IMPG2Q9BZV3 1241 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 TRIM31Q9BZY9 425 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 DENND2DQ9H6A0 471 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 XKR8Q9H6D3 395 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 WDR26Q9H7D7 661 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SCPEP1Q9HB40 452 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ZBTB26Q9HCK0 441 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SPATS2LQ9NUQ6 558 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 UBAP1Q9NZ09 502 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 ARMCX3Q9UH62 379 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 MBD1Q9UIS9 605 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 AJAP1Q9UKB5 411 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 AGO2Q9UKV8 859 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 INTS6Q9UL03 887 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms