RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 EDF1O60869 148 aaKnown RBP16.66■□□□□ 0.26
RAB40B-206ENST00000571995 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
RAB40B-206ENST00000571995 RCN1Q15293 331 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 ANO4Q32M45 955 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SLC45A4Q5BKX6 768 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 OTOP3Q7RTS5 596 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 EFHBQ8N7U6 833 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 DTLQ9NZJ0 730 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 NUP205Q92621 2012 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 COL2A1P02458 1487 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 VAPBO95292 243 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 POLBP06746 335 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 SLC10A2Q12908 348 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 CUL3Q13618 768 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 PDCD2Q16342 344 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 GLB1LQ6UWU2 654 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 CMASQ8NFW8 434 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 HDAC11Q96DB2 347 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 MFSD3Q96ES6 412 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 EME2A4GXA9 379 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 C3orf70A6NLC5 250 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 NRP1O14786 923 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 ADCY6O43306 1168 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 PMLP29590 882 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 GHRHRQ02643 423 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 FBXO48Q5FWF7 155 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 OSTM1Q86WC4 334 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 PQLC3Q8N755 202 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 EXOC2Q96KP1 924 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 SP110Q9HB58 689 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 KIAA1257Q9ULG3 409 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 ZFXP17010 805 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-206ENST00000571995 USP4Q13107 963 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 ZNF410Q86VK4 478 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 ATAD1Q8NBU5 361 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 GSDMBQ8TAX9 411 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 PCED1BQ96HM7 432 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 KLHL5Q96PQ7 755 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 OSBPL1AQ9BXW6 950 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 NMUR2Q9GZQ4 415 aa16.65■□□□□ 0.26
RAB40B-206ENST00000571995 GPC4O75487 556 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 LTFP02788 710 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 PCSK1P29120 753 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 CSE1LP55060 971 aaKnown RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 KYAT1Q16773 422 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 RGS9BPQ6ZS82 235 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 RMDN1Q96DB5 314 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 APOPT1Q96IL0 206 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 ZNF512Q96ME7 567 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 PTPN18Q99952 460 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 NT5MQ9NPB1 228 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 MT-CYBP00156 380 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 SERPINB5P36952 375 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 ACADSBP45954 432 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 CTBP1Q13363 440 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 TSNAXIP1Q2TAA8 658 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 OLFML1Q6UWY5 402 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 PTAR1Q7Z6K3 402 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 YTHDF3Q7Z739 585 aaKnown RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 LDB1Q86U70 411 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 ARRDC4Q8NCT1 418 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 A8MX80 341 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 NFKB1P19838 968 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 PRAMEP78395 509 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 MGAT5Q09328 741 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 MMEL1Q495T6 779 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 RPRD1AQ96P16 312 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 AGAP2Q99490 1192 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 KATNAL1Q9BW62 490 aa16.64■□□□□ 0.25
RAB40B-206ENST00000571995 RBM22Q9NW64 420 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAB40B-206ENST00000571995 FAM72CH0Y354 149 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 KPNB1Q14974 876 aaKnown RBP16.63■□□□□ 0.25
RAB40B-206ENST00000571995 FAM72AQ5TYM5 149 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 FAM72DQ6L9T8 149 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 FAM72BQ86X60 149 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 MYLPFQ96A32 169 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 ELMO2Q96JJ3 720 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 FICDQ9BVA6 458 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 YIPF3Q9GZM5 350 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 FAM189A1O60320 539 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 UNC5CO95185 931 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 TBX18O95935 607 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 GRK4P32298 578 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 PLIN5Q00G26 463 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 TSTA3Q13630 321 aaPredicted RBP16.63■□□□□ 0.25
RAB40B-206ENST00000571995 MAP7D1Q3KQU3 841 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 RFWD3Q6PCD5 774 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 SNX27Q96L92 541 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 ARHGEF4Q9NR80 690 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 PIGVQ9NUD9 493 aa16.63■□□□□ 0.25
RAB40B-206ENST00000571995 PSAT1Q9Y617 370 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms