RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 DHX35Q9H5Z1 703 aaKnown RBP24.23■■□□□ 1.47
RAB40C-212ENST00000569575 CATSPERBQ9H7T0 1116 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 ANLNQ9NQW6 1124 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 SLC2A4RGQ9NR83 387 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.23■■□□□ 1.47
RAB40C-212ENST00000569575 USP27XA6NNY8 438 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 H3BRJ5 948 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 I6L893 689 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-212ENST00000569575 KIF2AO00139 706 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-212ENST00000569575 SP100P23497 879 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-212ENST00000569575 HOXC13P31276 330 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 RUNX3Q13761 415 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 ZNF569Q5MCW4 686 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 RAP1GAP2Q684P5 730 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 FBXL22Q6P050 247 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 CHST9Q7L1S5 443 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 ZSCAN30Q86W11 494 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 CCDC117Q8IWD4 279 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-212ENST00000569575 TTC16Q8NEE8 873 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 ZYG11BQ9C0D3 744 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 LINC00597Q9H2U6 94 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 EFR3BQ9Y2G0 817 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 WNT6Q9Y6F9 365 aa24.22■■□□□ 1.47
RAB40C-212ENST00000569575 E9PAM4 449 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 HOXC11O43248 304 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-212ENST00000569575 CLDN11O75508 207 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 PENKP01210 267 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-212ENST00000569575 SRFP11831 508 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 ARSEP51690 589 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 KRT81Q14533 505 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 DHCR24Q15392 516 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 RPS6KA1Q15418 735 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 ITPRIPL2Q3MIP1 535 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 TJAP1Q5JTD0 557 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 KCNT1Q5JUK3 1230 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 ZFYVE27Q5T4F4 411 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 RNF43Q68DV7 783 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 ZNF683Q8IZ20 524 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 LGI2Q8N0V4 545 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 CSGALNACT1Q8TDX6 532 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 HSPH1Q92598 858 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 TBC1D31Q96DN5 1066 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 RPP25Q9BUL9 199 aaKnown RBP24.21■■□□□ 1.47
RAB40C-212ENST00000569575 ECT2Q9H8V3 914 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 XPO7Q9UIA9 1087 aaKnown RBP24.21■■□□□ 1.47
RAB40C-212ENST00000569575 SORCS3Q9UPU3 1222 aa24.21■■□□□ 1.47
RAB40C-212ENST00000569575 A0A1B0GVM2 712 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 TCAF2A6NFQ2 919 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 ARNTLO00327 626 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 LRIG2O94898 1065 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 TCF4P15884 667 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 KDELR1P24390 212 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 SLC6A4P31645 630 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 EIF2DP41214 584 aaKnown RBP24.2■■□□□ 1.46
RAB40C-212ENST00000569575 PEX5P50542 639 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 CDH4P55283 916 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 CDH6P55285 790 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 DAB2IPQ5VWQ8 1189 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 RHBDF2Q6PJF5 856 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 RPRD1AQ96P16 312 aaPredicted RBP24.2■■□□□ 1.46
RAB40C-212ENST00000569575 XPO6Q96QU8 1125 aaKnown RBP24.2■■□□□ 1.46
RAB40C-212ENST00000569575 GOLPH3Q9H4A6 298 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 C8orf33Q9H7E9 229 aaPredicted RBP24.2■■□□□ 1.46
RAB40C-212ENST00000569575 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.2■■□□□ 1.46
RAB40C-212ENST00000569575 VANGL2Q9ULK5 521 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 MYO10Q9HD67 2058 aa24.2■■□□□ 1.46
RAB40C-212ENST00000569575 WASH4PA8MWX3 477 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 EEF2KO00418 725 aaKnown RBP24.19■■□□□ 1.46
RAB40C-212ENST00000569575 FTCDO95954 541 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 RHOQP17081 205 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 TPI1P60174 286 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 GRM2Q14416 872 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 SMTNL2Q2TAL5 461 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 LY6G5CQ5SRR4 150 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 UBALD2Q8IYN6 164 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 LZTR1Q8N653 840 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 DDI1Q8WTU0 396 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 TSC1Q92574 1164 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 BBS2Q9BXC9 721 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 CARD9Q9H257 536 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 PCDH18Q9HCL0 1135 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 HYOU1Q9Y4L1 999 aa24.19■■□□□ 1.46
RAB40C-212ENST00000569575 GOLGA6L7A0A1B0GV03 622 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 LRRD1A4D1F6 860 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 DAPK3O43293 454 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 SRGAP2O75044 1071 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 CYP17A1P05093 508 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 ADH5P11766 374 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 ZFXP17010 805 aaPredicted RBP24.18■■□□□ 1.46
RAB40C-212ENST00000569575 EPHB2P29323 1055 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 PTPN7P35236 360 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
RAB40C-212ENST00000569575 MAPKAPK2P49137 400 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 GNG11P61952 73 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 PPP2R5EQ16537 467 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 PPP6R3Q5H9R7 873 aaPredicted RBP24.18■■□□□ 1.46
RAB40C-212ENST00000569575 FYB2Q5VWT5 728 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 TXNRD3NBQ6F5E7 133 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 ZNF783Q6ZMS7 281 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 RFX8Q6ZV50 586 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms