RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	GALE	Q14376	348 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	ELF2	Q15723	593 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	SLC5A9	Q2M3M2	681 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	ANXA2R	Q3ZCQ2	193 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	C6orf10	Q5SRN2	563 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	CAPRIN2	Q6IMN6	1127 aa	Known RBP	3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	RHPN2	Q8IUC4	686 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	SPATA2L	Q8IUW3	424 aa	Predicted RBP	3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	CCDC150	Q8NCX0	1101 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	OR52N4	Q8NGI2	321 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	TMEM174	Q8WUU8	243 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	ATP2A3	Q93084	1043 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	MIB2	Q96AX9	1013 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	MYLK2	Q9H1R3	596 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	KCNK9	Q9NPC2	374 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	CD93	Q9NPY3	652 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	DDX21	Q9NR30	783 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	HIF1AN	Q9NWT6	349 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	MYO1A	Q9UBC5	1043 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	SNX13	Q9Y5W8	968 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243		A0A1W2PPC1	479 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	MDM4	O15151	490 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	VIP	P01282	170 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	RFPL3S	P0C7P2	107 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	FGF3	P11487	239 aa	Predicted RBP	3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	RASSF2	P50749	326 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	PPAT	Q06203	517 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	CBFB	Q13951	182 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	PGM5	Q15124	567 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	TTC39A	Q5SRH9	613 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	CRTC1	Q6UUV9	634 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	DHRS13	Q6UX07	377 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	LRIG3	Q6UXM1	1119 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	PIK3AP1	Q6ZUJ8	805 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	DGKH	Q86XP1	1220 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	CCDC28A	Q8IWP9	274 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	DDIAS	Q8IXT1	998 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	SRFBP1	Q8NEF9	429 aa	Known RBP	3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	ELP5	Q8TE02	316 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	ASB5	Q8WWX0	329 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	SNX27	Q96L92	541 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	PAAF1	Q9BRP4	392 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	CA14	Q9ULX7	337 aa		3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	G3BP2	Q9UN86	482 aa	Known RBP	3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	UBE2J1	Q9Y385	318 aa	Predicted RBP	3.86	□□□□□ -1.79
UBR1-209	ENST00000569243	GXYLT2	A0PJZ3	443 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	RHPN2P1	A8MT19	583 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	LCK	P06239	509 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	HOXC6	P09630	235 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	EGR1	P18146	543 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	FGFR2	P21802	821 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	TNFRSF8	P28908	595 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	ZNF543	Q08ER8	600 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	ASPHD1	Q5U4P2	390 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	ZNF324B	Q6AW86	544 aa	Predicted RBP	3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	PAQR4	Q8N4S7	273 aa	Predicted RBP	3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	RNF152	Q8N8N0	203 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	ADPRHL1	Q8NDY3	354 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	TSR2	Q969E8	191 aa	Known RBP	3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	EIF3C	Q99613	913 aa	Known RBP	3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	UTS2R	Q9UKP6	389 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243	LAMP3	Q9UQV4	416 aa		3.85	□□□□□ -1.79
UBR1-209	ENST00000569243		A0A1W2PPC4	97 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	RPS10-NUDT3	A0A1W2PQS6	291 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	TNFRSF13B	O14836	293 aa	Predicted RBP	3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	DHH	O43323	396 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	PPP6R2	O75170	966 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	ATF3	P18847	181 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	TGM2	P21980	687 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	ROR2	Q01974	943 aa	Known RBP	3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	NSUN2	Q08J23	767 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	KIAA1755	Q5JYT7	1200 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	RRAGB	Q5VZM2	374 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	NUGGC	Q68CJ6	796 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	ZNF329	Q86UD4	541 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	TTC30A	Q86WT1	665 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	NUDCD2	Q8WVJ2	157 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	PHF21B	Q96EK2	531 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	SPAG4	Q9NPE6	437 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	B3GNT3	Q9Y2A9	372 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	PCDHB7	Q9Y5E2	793 aa		3.84	□□□□□ -1.79
UBR1-209	ENST00000569243	CLEC18A	A5D8T8	446 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243		A6NNC1	897 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	RHOD	O00212	210 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	NPC1	O15118	1278 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	GRID2	O43424	1007 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	YY1	P25490	414 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	GABRB3	P28472	473 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	HLTF	Q14527	1009 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	MAPKAPK3	Q16644	382 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	SLC4A8	Q2Y0W8	1093 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243		Q5PR19	223 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	PARM1	Q6UWI2	310 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	SLC39A5	Q6ZMH5	540 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	C14orf80	Q86SX3	495 aa		3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	RBM23	Q86U06	439 aa	Known RBP	3.83	□□□□□ -1.8
UBR1-209	ENST00000569243	NR2C2AP	Q86WQ0	139 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms