RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ENC1O14682 589 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 IKBKBO14920 756 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 PCDHGA12O60330 932 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 ZBED1O96006 694 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 KRT10P13645 584 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 LCP1P13796 627 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 VAV1P15498 845 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 PFKFB1P16118 471 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 ZNF132P52740 706 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 C21orf59P57076 290 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 ATMQ13315 3056 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 HES3Q5TGS1 186 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 BSPRYQ5W0U4 402 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 MMAAQ8IVH4 418 aaKnown RBP15.47■□□□□ 0.07
USB1-214ENST00000568848 SCUBE3Q8IX30 993 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 ZNF276Q8N554 614 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 TMA16Q96EY4 203 aaKnown RBP15.47■□□□□ 0.07
USB1-214ENST00000568848 TMEM176AQ96HP8 235 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 INTS4Q96HW7 963 aaKnown RBP15.47■□□□□ 0.07
USB1-214ENST00000568848 SLC2A11Q9BYW1 496 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 IMPG2Q9BZV3 1241 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 NEUROG2Q9H2A3 272 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 PABPC3Q9H361 631 aaKnown RBP15.47■□□□□ 0.07
USB1-214ENST00000568848 FBXL12Q9NXK8 326 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 NYNRINQ9P2P1 1898 aaKnown RBP15.47■□□□□ 0.07
USB1-214ENST00000568848 TSPAN16Q9UKR8 245 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 PLA2G4CQ9UP65 541 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 CA5BQ9Y2D0 317 aa15.47■□□□□ 0.07
USB1-214ENST00000568848 TTC34A8MYJ7 566 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 K7ELQ4 463 aaPredicted RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 SLFN14P0C7P3 912 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 JUPP14923 745 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 PSMD8P48556 350 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 ACADVLP49748 655 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 BCAT1P54687 386 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 GALCP54803 685 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 PPP2CBP62714 309 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 RPS24P62847 133 aaKnown RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 PPP2CAP67775 309 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 LRMPQ12912 555 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 FAM133BQ5BKY9 247 aaKnown RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 FSCBQ5H9T9 825 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 ZNF776Q68DI1 518 aaPredicted RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 KIAA0907Q7Z7F0 614 aaPredicted RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 CFAP52Q8N1V2 620 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 LMLNQ96KR4 655 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 MRGPRX3Q96LB0 322 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 CDK5RAP1Q96SZ6 601 aaKnown RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 PRORYQ9H606 182 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 AASDHPPTQ9NRN7 309 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 XPO7Q9UIA9 1087 aaKnown RBP15.46■□□□□ 0.07
USB1-214ENST00000568848 AK5Q9Y6K8 562 aa15.46■□□□□ 0.07
USB1-214ENST00000568848 CALUO43852 315 aaPredicted RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 SDC3O75056 442 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 RNASEH2AO75792 299 aaKnown RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 LDOC1O95751 146 aaPredicted RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 F13A1P00488 732 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 DLDP09622 509 aaKnown RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 CD19P15391 556 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 CSKP41240 450 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 HARS2P49590 506 aaKnown RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 ARHGAP17Q68EM7 881 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 PM20D1Q6GTS8 502 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 PCSK4Q6UW60 755 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 AHI1Q8N157 1196 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.45■□□□□ 0.06
USB1-214ENST00000568848 ANKRD52Q8NB46 1076 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 WFIKKN2Q8TEU8 576 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 RNF139Q8WU17 664 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 COL26A1Q96A83 441 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 FCRL3Q96P31 734 aaPredicted RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 ELF4Q99607 663 aaPredicted RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 ZSWIM1Q9BR11 485 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 ACE2Q9BYF1 805 aaPredicted RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 PCED1AQ9H1Q7 454 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 RSPH9Q9H1X1 276 aaPredicted RBP15.45■□□□□ 0.06
USB1-214ENST00000568848 LRRC4Q9HBW1 653 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 TMEM8AQ9HCN3 771 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 TRAF3IP3Q9Y228 551 aa15.45■□□□□ 0.06
USB1-214ENST00000568848 A0A1W2PPC4 97 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 A0A1W2PR77 199 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 VILLO15195 856 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 TIMM44O43615 452 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 RFPL3O75679 317 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 ITGAVP06756 1048 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 MYF5P13349 255 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 KRT13P13646 458 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 POLR2EP19388 210 aaKnown RBP15.44■□□□□ 0.06
USB1-214ENST00000568848 ABCB4P21439 1286 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 STK19P49842 368 aaPredicted RBP15.44■□□□□ 0.06
USB1-214ENST00000568848 CCDC173Q0VFZ6 552 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 POM121L1PQ3SYA9 428 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 TTC31Q49AM3 519 aaPredicted RBP15.44■□□□□ 0.06
USB1-214ENST00000568848 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
USB1-214ENST00000568848 ADGRF1Q5T601 910 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms