RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BTBD9Q96Q07 612 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 IARS2Q9NSE4 1012 aaKnown RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 MID2Q9UJV3 735 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 SORCS3Q9UPU3 1222 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 SNX5Q9Y5X3 404 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 KRT75O95678 551 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 CDK4P11802 303 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 GARTP22102 1010 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 CCND2P30279 289 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 TNFSF9P41273 254 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 SPIDRQ14159 915 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 DLG2Q15700 870 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 FAM131BQ86XD5 332 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 COLGALT1Q8NBJ5 622 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 PHF21BQ96EK2 531 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 COQ6Q9Y2Z9 468 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 A0A087WXM4 84 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 PSMD12O00232 456 aaPredicted RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 E2F6O75461 281 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 ESRRBO95718 433 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 CLIC3O95833 236 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 ALOX15P16050 662 aaPredicted RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 RPL10P27635 214 aaKnown RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 BNIP3Q12983 259 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 PTPN20Q4JDL3 420 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 SLC9B1Q4ZJI4 515 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 ZNF618Q5T7W0 954 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 TEDDM1Q5T9Z0 273 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 CROCCP3Q8IVE0 287 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 LARGE2Q8N3Y3 721 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 MAGEE2Q8TD90 523 aaPredicted RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 PRMT6Q96LA8 375 aaPredicted RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 APBA2Q99767 749 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 SSU72Q9NP77 194 aaKnown RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 ITGA11Q9UKX5 1188 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 BLOC1S6Q9UL45 172 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 C9JVG2 144 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 M0R3G1 203 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 INPP4BO15327 924 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 GRIA2P42262 883 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 MAGEA8P43361 318 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 Q3C1V9 767 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 CMPK2Q5EBM0 449 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 CHST15Q7LFX5 561 aaPredicted RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 SLC35B2Q8TB61 432 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 OR52B2Q96RD2 323 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 ZNF302Q9NR11 478 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 AP4E1Q9UPM8 1137 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 SIGLEC16A6NMB1 481 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 ANGPT2O15123 496 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 WDR46O15213 610 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 DNAJA2O60884 412 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 ITGB3P05106 788 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 IL1R1P14778 569 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 PCSK6P29122 969 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 GNA12Q03113 381 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 FBXL19Q6PCT2 694 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 CCDC81Q6ZN84 652 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 ARCQ7LC44 396 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 BPIFB6Q8NFQ5 453 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 HPS1Q92902 700 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 FIZ1Q96SL8 496 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 NOL6Q9H6R4 1146 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 USP29Q9HBJ7 922 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 NMRAL1Q9HBL8 299 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 ANKEF1Q9NU02 776 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 EURLQ9NYK6 297 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 TRDMT1O14717 391 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 TFAP2AP05549 437 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 HNRNPLP14866 589 aaKnown RBP eCLIP11.16□□□□□ -0.623e-6■■■■□ 20.5
PALB2-206ENST00000568219 NFKBIAP25963 317 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 YAP1P46937 504 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 PGGT1BP53609 377 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 STX5Q13190 355 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 RGS21Q2M5E4 152 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 PACS1Q6VY07 963 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 C4orf19Q8IY42 314 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 LGMNQ99538 433 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 GLIS2Q9BZE0 524 aaPredicted RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 OSBPL6Q9BZF3 934 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 C20orf27Q9GZN8 174 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
PALB2-206ENST00000568219 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
PALB2-206ENST00000568219 DGKBQ9Y6T7 804 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms