RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 IRX2Q9BZI1 471 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-220ENST00000567720 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 WDCPQ9H6R7 721 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 NHEJ1Q9H9Q4 299 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-220ENST00000567720 SPTLC3Q9NUV7 552 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 C2orf42Q9NWW7 574 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 MYO1AQ9UBC5 1043 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 SNX10Q9Y5X0 201 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 ANKRD62A6NC57 917 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 F5H5T6 163 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 GALR2O43603 387 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-220ENST00000567720 TBL1XO60907 577 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 SEC13P55735 322 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 FBXO43Q4G163 708 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 C10orf76Q5T2E6 689 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 CIR1Q86X95 450 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-220ENST00000567720 CFAP52Q8N1V2 620 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 SYNPOQ8N3V7 929 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 CCDC185Q8N715 623 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 TMA16Q96EY4 203 aaKnown RBP17.81■□□□□ 0.44
COMMD4-220ENST00000567720 CNPY3Q9BT09 278 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 IER2Q9BTL4 223 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 SLC12A6Q9UHW9 1150 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 SLC27A6Q9Y2P4 619 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 PAXBP1Q9Y5B6 917 aa17.81■□□□□ 0.44
COMMD4-220ENST00000567720 TMEM191CA6NGB0 347 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 PRRT4C9JH25 899 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 AKR1B10O60218 316 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 HLA-FP30511 346 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 GALCP54803 685 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 MTA1Q13330 715 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 AUHQ13825 339 aaKnown RBP17.8■□□□□ 0.44
COMMD4-220ENST00000567720 GEN1Q17RS7 908 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 MPP7Q5T2T1 576 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 ARTNQ5T4W7 220 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 FBXL22Q6P050 247 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 C14orf80Q86SX3 495 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 ZNF683Q8IZ20 524 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 MAML2Q8IZL2 1156 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-220ENST00000567720 RPLP0P6Q8NHW5 317 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 IGSF8Q969P0 613 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 ZDHHC4Q9NPG8 344 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 PRMT8Q9NR22 394 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-220ENST00000567720 SPATA6Q9NWH7 488 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-220ENST00000567720 STIM2Q9P246 746 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 RAPGEFL1Q9UHV5 662 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 HCN2Q9UL51 889 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 VANGL2Q9ULK5 521 aa17.8■□□□□ 0.44
COMMD4-220ENST00000567720 A0A0A0MRY4 1105 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 TYW5A2RUC4 315 aaKnown RBP17.79■□□□□ 0.44
COMMD4-220ENST00000567720 CYP1A2P05177 515 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 FECHP22830 423 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 PSMA2P25787 234 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 KIR2DL1P43626 348 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-220ENST00000567720 NUBP1P53384 320 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 SATB1Q01826 763 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 ANKS1BQ7Z6G8 1248 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 MFN1Q8IWA4 741 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.79■□□□□ 0.44
COMMD4-220ENST00000567720 USP33Q8TEY7 942 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 FNIP1Q8TF40 1166 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 CCDC42Q96M95 316 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 SLC2A11Q9BYW1 496 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 SIK2Q9H0K1 926 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 TMEM51Q9NW97 253 aa17.79■□□□□ 0.44
COMMD4-220ENST00000567720 USP34Q70CQ2 3546 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 TBC1D3BA6NDS4 549 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 CHURC1-FNTBB4DL54 471 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 LUC7L3O95232 432 aaKnown RBP17.78■□□□□ 0.44
COMMD4-220ENST00000567720 CD70P32970 193 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 TCF15Q12870 199 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 ANGPT1Q15389 498 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 PREPLQ4J6C6 727 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-220ENST00000567720 C2orf27AQ580R0 203 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 RABGAP1LQ5R372 815 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 TTC39BQ5VTQ0 682 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-220ENST00000567720 TMEM215Q68D42 235 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 C1orf210Q8IVY1 113 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 SPEM1Q8N4L4 309 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 SPC24Q8NBT2 197 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 NTAN1Q96AB6 310 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 LMLNQ96KR4 655 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 RPRD1AQ96P16 312 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-220ENST00000567720 PANX2Q96RD6 677 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 NUP85Q9BW27 656 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 MRPL47Q9HD33 250 aaKnown RBP17.78■□□□□ 0.44
COMMD4-220ENST00000567720 ABCB8Q9NUT2 735 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 POLR3BQ9NW08 1133 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-220ENST00000567720 NEU3Q9UQ49 428 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 HCN4Q9Y3Q4 1203 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 PLXND1Q9Y4D7 1925 aa17.78■□□□□ 0.44
COMMD4-220ENST00000567720 A0A1B0GVM2 712 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 TCAF2A6NFQ2 919 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 TDGF1P13385 188 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 HOXC13P31276 330 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 TNFRSF4P43489 277 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 SCAPQ12770 1279 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 CDH18Q13634 790 aa17.77■□□□□ 0.44
COMMD4-220ENST00000567720 C5orf22Q49AR2 442 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms