RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PPP6R3Q5H9R7 873 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 TRMT10BQ6PF06 316 aaKnown RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 KCNT2Q6UVM3 1135 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 ACOT1Q86TX2 421 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 ALYREFQ86V81 257 aaKnown RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 MICAL1Q8TDZ2 1067 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 PXYLP1Q8TE99 480 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 CDKL2Q92772 493 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 SPATA13Q96N96 652 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 CSPG4P5Q96PW8 444 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 MECRQ9BV79 373 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 CCDC106Q9BWC9 280 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 OSBPL1AQ9BXW6 950 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 SLC13A1Q9BZW2 595 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 NMRK1Q9NWW6 199 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 SF3B1O75533 1304 aaKnown RBP eCLIP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 PPP1R12AO14974 1030 aaPredicted RBP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 UGT1A9O60656 530 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 GLRA3O75311 464 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 ELNP15502 786 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 BCAT1P54687 386 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 KLC1Q07866 573 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 NIPAL4Q0D2K0 466 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 BMPR2Q13873 1038 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 INSCQ1MX18 579 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 TRMT5Q32P41 509 aaKnown RBP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 SNX30Q5VWJ9 437 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 IRGCQ6NXR0 463 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 LRRC8BQ6P9F7 803 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 ALKAL1Q6UXT8 129 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 RSPH3Q86UC2 560 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 ANKRD52Q8NB46 1076 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 PCSK9Q8NBP7 692 aaKnown RBP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 TFB1MQ8WVM0 346 aaKnown RBP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 SNX27Q96L92 541 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 DHX35Q9H5Z1 703 aaKnown RBP17.25■□□□□ 0.35
CMTM3-213ENST00000566756 UGT1A7Q9HAW7 530 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 UGT1A10Q9HAW8 530 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 UGT1A8Q9HAW9 530 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 PCMTD2Q9NV79 361 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 USP3Q9Y6I4 520 aa17.25■□□□□ 0.35
CMTM3-213ENST00000566756 B2RBV5 119 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SPECC1L-ADORA2AF8WAN1 911 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 TM7SF2O76062 418 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 ASGR1P07306 291 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SKIP12755 728 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 MRPS6P82932 125 aaKnown RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 AP1B1Q10567 949 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 C6orf163Q5TEZ5 329 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 NCBP2-AS2Q69YL0 99 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 GDF6Q6KF10 455 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 LRRC74BQ6ZQY2 392 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SERINC5Q86VE9 423 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 ADGRF2Q8IZF7 708 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 CRYBG2Q8N1P7 616 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 BEST2Q8NFU1 509 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 CD99L2Q8TCZ2 262 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 HTR3CQ8WXA8 447 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 FAM136AQ96C01 138 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SPDL1Q96EA4 605 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 HSFY1Q96LI6 401 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 FERMT1Q9BQL6 677 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SNTG2Q9NY99 539 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 DTLQ9NZJ0 730 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 PPARGC1AQ9UBK2 798 aaKnown RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 PLA2G4CQ9UP65 541 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SNX9Q9Y5X1 595 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 SDR42E2A6NKP2 422 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 M0QZ92 97 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 CAPN9O14815 690 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 OPHN1O60890 802 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 STK10O94804 968 aaKnown RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 AOC1P19801 751 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 PAX7P23759 505 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 AQP5P55064 265 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 KCNA10Q16322 511 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 MROH9Q5TGP6 573 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 CES4AQ5XG92 561 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 TREML1Q86YW5 311 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 WDR75Q8IWA0 830 aaKnown RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 MPP5Q8N3R9 675 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 PDCD7Q8N8D1 485 aaKnown RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 PPFIBP2Q8ND30 876 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 ATP2A3Q93084 1043 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 KCTD15Q96SI1 283 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 DCDC2Q9UHG0 476 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 ANGPTL2Q9UKU9 493 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
CMTM3-213ENST00000566756 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
CMTM3-213ENST00000566756 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 KRT36O76013 467 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 MYL4P12829 197 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 ARL4AP40617 200 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 XKR4Q5GH76 650 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 UBXN11Q5T124 520 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 TRIM68Q6AZZ1 485 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 WDR60Q8WVS4 1066 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 FAM49BQ9NUQ9 324 aa17.23■□□□□ 0.35
CMTM3-213ENST00000566756 ARMCX1Q9P291 453 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms