RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 RASGRP3Q8IV61 690 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 BBS7Q8IWZ6 715 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 CCDC105Q8IYK2 499 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 GALNT4Q8N4A0 578 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 CAMKK1Q8N5S9 505 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 DNAAF3Q8N9W5 541 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 KCNH5Q8NCM2 988 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 FLCNQ8NFG4 579 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 OR8K5Q8NH50 307 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 VANGL1Q8TAA9 524 aaPredicted RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 FAM167AQ96KS9 214 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 TSGA13Q96PP4 275 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 EYA1Q99502 592 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 MLPHQ9BV36 600 aaPredicted RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 TARS2Q9BW92 718 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 BRINP2Q9C0B6 783 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 LHX5Q9H2C1 402 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 TRIT1Q9H3H1 467 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 TRIM45Q9H8W5 580 aaPredicted RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 ERVMER34-1Q9H9K5 563 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 CXorf21Q9HAI6 301 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 SP110Q9HB58 689 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 MRM3Q9HC36 420 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 WDR6Q9NNW5 1121 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 CD320Q9NPF0 282 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 RPRD1BQ9NQG5 326 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 ARL8BQ9NVJ2 186 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 CCDC59Q9P031 241 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 CEP72Q9P209 647 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 NYAP2Q9P242 653 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 PI4KBQ9UBF8 816 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 VPS28Q9UK41 221 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 ITGA11Q9UKX5 1188 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 PSME2Q9UL46 239 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 PA2G4Q9UQ80 394 aaKnown RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 FARP1Q9Y4F1 1045 aaPredicted RBP6.45□□□□□ -1.38
PTPN9-204ENST00000564970 AUP1Q9Y679 476 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 MRC1P22897 1456 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 EMSYQ7Z589 1322 aa6.45□□□□□ -1.38
PTPN9-204ENST00000564970 NID2Q14112 1375 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CCDC163A0A0D9SF12 145 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 PLEKHG3A1L390 1219 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 SFI1A8K8P3 1242 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 KLRF2D3W0D1 207 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 H3BMQ9 156 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 EYA2O00167 538 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 WRBO00258 174 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 E2F3O00716 465 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 KCNN4O15554 427 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CALUO43852 315 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 GAS7O60861 476 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 NDUFS2O75306 463 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 TRIM3O75382 744 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CRTAPO75718 401 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CCNDBP1O95273 360 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 TRIM16O95361 564 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 NADKO95544 446 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 NDST3O95803 873 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 KRT1P04264 644 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 TFPTP0C1Z6 253 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 HPGDP15428 266 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CD44P16070 742 aaKnown RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CCNE1P24864 410 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 MAP4P27816 1152 aaKnown RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 PEX2P28328 305 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 EEF1DP29692 281 aaKnown RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ERP29P30040 261 aaKnown RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CDC25AP30304 524 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 FOXN2P32314 431 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 HPCAL1P37235 193 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ARL1P40616 181 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 NPY2RP49146 381 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 MAPK12P53778 367 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 HIRAP54198 1017 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 BPIFB3P59826 476 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 RAC1P63000 192 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ZNF200P98182 395 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 TNFAIP2Q03169 654 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 VAC14Q08AM6 782 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 NFATC3Q12968 1075 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CSTF3Q12996 717 aaKnown RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CAMK1Q14012 370 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 LRRC14Q15048 493 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 CYP1B1Q16678 543 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 PTPN21Q16825 1174 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ZFP69Q49AA0 526 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 YIF1BQ5BJH7 314 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ARSHQ5FYA8 562 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 FSCBQ5H9T9 825 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 BRMS1LQ5PSV4 323 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 RABGAP1LQ5R372 815 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 VARS2Q5ST30 1063 aaKnown RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 PIK3R6Q5UE93 754 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 LMBRD2Q68DH5 695 aaPredicted RBP6.44□□□□□ -1.38
PTPN9-204ENST00000564970 KRT40Q6A162 431 aa6.44□□□□□ -1.38
PTPN9-204ENST00000564970 ELP2Q6IA86 826 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms