RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 FAM69AQ5T7M9 428 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 ZNF280DQ6N043 979 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 KIAA1324Q6UXG2 1013 aaKnown RBP2.84□□□□□ -1.95
CHD9-209ENST00000564255 Q6ZWC4 215 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 WDR53Q7Z5U6 358 aaPredicted RBP2.84□□□□□ -1.95
CHD9-209ENST00000564255 TTC9BQ8N6N2 239 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 SIRT6Q8N6T7 355 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 LSMEM1Q8N8F7 131 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 ASB10Q8WXI3 467 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 ADOQ96SZ5 270 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 ELOVL1Q9BW60 279 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 CINPQ9BW66 212 aaPredicted RBP2.84□□□□□ -1.95
CHD9-209ENST00000564255 PDCL3Q9H2J4 239 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 ANKEF1Q9NU02 776 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 THAP1Q9NVV9 213 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 MTMR4Q9NYA4 1195 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 MGAT4CQ9UBM8 478 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 PCDHB2Q9Y5E7 798 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 SPATA31A1Q5TZJ5 1347 aa2.84□□□□□ -1.95
CHD9-209ENST00000564255 NPIPB13A6NJU9 1138 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 NPIPB5A8MRT5 1133 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 NPIPB4C9JG80 1138 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 GRM8O00222 908 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 TSPAN4O14817 238 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 METTL18O95568 372 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 FESP07332 822 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 ARL1P40616 181 aaPredicted RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 RGS2P41220 211 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 DIO1P49895 249 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 TXNL4AP83876 142 aaKnown RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 E2F1Q01094 437 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 TBC1D25Q3MII6 688 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 DENND2CQ68D51 928 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 PDXDC1Q6P996 788 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 TMEM88Q6PEY1 159 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 PARS2Q7L3T8 475 aaKnown RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 ZNF551Q7Z340 670 aaPredicted RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 P3H2Q8IVL5 708 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 DIS3L2Q8IYB7 885 aaKnown RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 IL17DQ8TAD2 202 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 CD180Q99467 661 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 CLSTN3Q9BQT9 956 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 ITPAQ9BY32 194 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 RNF26Q9BY78 433 aaPredicted RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 TLR8Q9NR97 1041 aaKnown RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 PLSCR4Q9NRQ2 329 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 TBCCD1Q9NVR7 557 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 BEX4Q9NWD9 120 aaPredicted RBP2.84□□□□□ -1.96
CHD9-209ENST00000564255 TBC1D29Q9UFV1 150 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 TESMINQ9Y4I5 508 aa2.84□□□□□ -1.96
CHD9-209ENST00000564255 CENPVL1A0A0U1RR11 272 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 UNC119BA6NIH7 251 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 TNPO2O14787 897 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 TMPRSS11DO60235 418 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PRAMEF2O60811 474 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 ALDOAP04075 364 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 MYCLP12524 364 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 PEPDP12955 493 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 LYL1P12980 280 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 ZNF37AP17032 561 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 SFPQP23246 707 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-209ENST00000564255 CDH15P55291 814 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 GPC5P78333 572 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 GUCY1B3Q02153 619 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 NUCB1Q02818 461 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 CDK18Q07002 472 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 SEMA3AQ14563 771 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PRKD1Q15139 912 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 PXKQ7Z7A4 578 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 SFTPA1Q8IWL2 248 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 ZNF276Q8N554 614 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 LINC01465Q8N7H1 131 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 C12orf76Q8N812 135 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 RFWD2Q8NHY2 731 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 XAGE5Q8WWM1 108 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 RNFT2Q96EX2 444 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PTCD3Q96EY7 689 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 SNX18Q96RF0 628 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 NR1H4Q96RI1 486 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 FSD1LQ9BXM9 530 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 CCDC68Q9H2F9 335 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 KRT84Q9NSB2 600 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 ABHD10Q9NUJ1 306 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 SUFUQ9UMX1 484 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PSAT1Q9Y617 370 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 RSF1Q96T23 1441 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 TEX22C9J3V5 150 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 CES2O00748 559 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 AHCYL1O43865 530 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 TIPRLO75663 272 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 C1RP00736 705 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 WEE2P0C1S8 567 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 ACADMP11310 421 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 UBL4AP11441 157 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PRPH2P23942 346 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 HOXD12P35452 270 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 HOXD13P35453 343 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 HNF1BP35680 557 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PAFAH1B1P43034 410 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms