RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	CNGB3	Q9NQW8	809 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TMEM74B	Q9NUR3	256 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CHMP5	Q9NZZ3	219 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	BCCIP	Q9P287	314 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TJP2	Q9UDY2	1190 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	RWDD2A	Q9UIY3	292 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	AKAP13	Q12802	2813 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	ZFHX4	Q86UP3	3567 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	GOLGA6L7	A0A1B0GV03	622 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	ALDH1A2	O94788	518 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	GNA14	O95837	355 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	LTF	P02788	710 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	PNMA6A	P0CW24	399 aa	Predicted RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	BMP2	P12643	396 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	KRT5	P13647	590 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	PRKCH	P24723	683 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	HLA-F	P30511	346 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	CHKA	P35790	457 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	GPD2	P43304	727 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	RPL34	P49207	117 aa	Known RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	LIMK1	P53667	647 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	PITX1	P78337	314 aa	Predicted RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	HSP90AA4P	Q58FG1	418 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	FAM133B	Q5BKY9	247 aa	Known RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	PPM1J	Q5JR12	505 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	STPG1	Q5TH74	334 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	NADSYN1	Q6IA69	706 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	DPY19L2P1	Q6NXN4	242 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	RFWD3	Q6PCD5	774 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	CYP2U1	Q7Z449	544 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	TRMT11	Q7Z4G4	463 aa	Known RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	ANKS1B	Q7Z6G8	1248 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	PGBD3	Q8N328	593 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	SPACA7	Q96KW9	195 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	MRGPRX1	Q96LB2	322 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	PRICKLE1	Q96MT3	831 aa	Predicted RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	EDEM2	Q9BV94	578 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	DCLK3	Q9C098	648 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	SIX2	Q9NPC8	291 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	UBE2T	Q9NPD8	197 aa	Predicted RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	FSCN3	Q9NQT6	498 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	VPS45	Q9NRW7	570 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	ABCC13	Q9NSE7	274 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	OLA1	Q9NTK5	396 aa	Known RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	STOML2	Q9UJZ1	356 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	KIAA1257	Q9ULG3	409 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	STRIP2	Q9ULQ0	834 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	CYP8B1	Q9UNU6	501 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	ZNF510	Q9Y2H8	683 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	SLC27A6	Q9Y2P4	619 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	HBS1L	Q9Y450	684 aa	Known RBP	7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	STON1	Q9Y6Q2	735 aa		7.71	□□□□□ -1.17
ZEB1-223	ENST00000561304	CHD5	Q8TDI0	1954 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	IGHV1OR15-9	A0A0B4J2B8	117 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304		E5RJQ4	531 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	PAPSS1	O43252	624 aa	Predicted RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	LETM1	O95202	739 aa	Predicted RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	HLA-E	P13747	358 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	SDHB	P21912	280 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	ITPKA	P23677	461 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	PON1	P27169	355 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	GNA15	P30679	374 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	RAB15	P59190	212 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	IRX4	P78413	519 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	CETN1	Q12798	172 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	CBLB	Q13191	982 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	ENPP2	Q13822	863 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	ZNF234	Q14588	700 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	STIL	Q15468	1287 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	ARHGAP44	Q17R89	818 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	FUT11	Q495W5	492 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	PREPL	Q4J6C6	727 aa	Predicted RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	MIIP	Q5JXC2	388 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	C6orf118	Q5T5N4	469 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	SYPL2	Q5VXT5	272 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	RNF43	Q68DV7	783 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	TAC4	Q86UU9	113 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	CACUL1	Q86Y37	369 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	CREBRF	Q8IUR6	639 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	SLC41A1	Q8IVJ1	513 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	ZNF366	Q8N895	744 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	DQX1	Q8TE96	717 aa	Known RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	DDI1	Q8WTU0	396 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	RNF139	Q8WU17	664 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	CYB5D2	Q8WUJ1	264 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	ZNF606	Q8WXB4	792 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	IRGQ	Q8WZA9	623 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	PIGK	Q92643	395 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	FCRL2	Q96LA5	508 aa	Predicted RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	MKRN2	Q9H000	416 aa	Known RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	TMPRSS4	Q9NRS4	437 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	THAP10	Q9P2Z0	257 aa	Predicted RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	XPO7	Q9UIA9	1087 aa	Known RBP	7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	NAALADL1	Q9UQQ1	740 aa		7.71	□□□□□ -1.18
ZEB1-223	ENST00000561304	PTPRB	P23467	1997 aa		7.7	□□□□□ -1.18
ZEB1-223	ENST00000561304	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.7	□□□□□ -1.18
ZEB1-223	ENST00000561304	PCNX2	A6NKB5	2137 aa		7.7	□□□□□ -1.18
ZEB1-223	ENST00000561304	FREM2	Q5SZK8	3169 aa		7.7	□□□□□ -1.18
ZEB1-223	ENST00000561304	FAM170A	A1A519	330 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms