RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 RDM1Q8NG50 284 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 CCDC51Q96ER9 411 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 LOXL4Q96JB6 756 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 RBM15Q96T37 977 aaKnown RBP eCLIP6.56□□□□□ -1.36
CRNDE-207ENST00000559598 FDXACB1Q9BRP7 624 aaPredicted RBP6.56□□□□□ -1.36
CRNDE-207ENST00000559598 RPP25Q9BUL9 199 aaKnown RBP6.56□□□□□ -1.36
CRNDE-207ENST00000559598 COLEC11Q9BWP8 271 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 ZMAT4Q9H898 229 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 GRPEL1Q9HAV7 217 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 TRPV5Q9NQA5 729 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 SPTLC3Q9NUV7 552 aa6.56□□□□□ -1.36
CRNDE-207ENST00000559598 CNOT11Q9UKZ1 510 aaKnown RBP6.56□□□□□ -1.36
CRNDE-207ENST00000559598 PRG3Q9Y2Y8 225 aaPredicted RBP6.56□□□□□ -1.36
CRNDE-207ENST00000559598 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
CRNDE-207ENST00000559598 SF3B1O75533 1304 aaKnown RBP eCLIP6.55□□□□□ -1.364e-7■■■■■ 86.2
CRNDE-207ENST00000559598 FLNBO75369 2602 aaKnown RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 CSDE1O75534 798 aaKnown RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 CNOT4O95628 575 aaKnown RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 POMCP01189 267 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ZNF806P0C7X5 589 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 CD72P21854 359 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 CD40P25942 277 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 AXLP30530 894 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 HOXA6P31267 233 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 CXCL12P48061 93 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 LSSP48449 732 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ANTXR2P58335 489 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 LRRC32Q14392 662 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 MYBPC3Q14896 1274 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 LPAL2Q16609 132 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ZNF568Q3ZCX4 644 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 LONRF3Q496Y0 759 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 PABPC1LQ4VXU2 614 aaKnown RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 XKR3Q5GH77 459 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ZMAT1Q5H9K5 638 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 FUT10Q6P4F1 479 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 SRGAP1Q7Z6B7 1085 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 PALB2Q86YC2 1186 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 HACE1Q8IYU2 909 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 SPEM1Q8N4L4 309 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 RUFY2Q8WXA3 655 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 CRYGNQ8WXF5 182 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ELSPBP1Q96BH3 223 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ZNF668Q96K58 619 aaPredicted RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 RIT2Q99578 217 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 KXD1Q9BQD3 176 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 HEBP1Q9NRV9 189 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 RBM28Q9NW13 759 aaKnown RBP6.55□□□□□ -1.36
CRNDE-207ENST00000559598 BARHL2Q9NY43 387 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 PPP4R1LQ9P1A2 415 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 PRDM4Q9UKN5 801 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ADAM28Q9UKQ2 775 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 PCDHGA5Q9Y5G8 931 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 NUP205Q92621 2012 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ARID2Q68CP9 1835 aa6.55□□□□□ -1.36
CRNDE-207ENST00000559598 ESYT2A0FGR8 921 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 NPEPPSL1A6NEC2 478 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 SMCO2A6NFE2 343 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 ARL5CA6NH57 179 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 K7ESM1 405 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 SH2B2O14492 632 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 EPN2O95208 641 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 KCNK5O95279 499 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 FKBP9O95302 570 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 CIITAP33076 1130 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 MASP1P48740 699 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 NCBP1Q09161 790 aaKnown RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 EFEMP1Q12805 493 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 ELAVL2Q12926 359 aaKnown RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 GRIK3Q13003 919 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 DHCR24Q15392 516 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 GPR158Q5T848 1215 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 NOTUMQ6P988 496 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 LARP4Q71RC2 724 aaKnown RBP eCLIP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 FKBP9P1Q75LS8 142 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 TAS1R1Q7RTX1 841 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 RHPN2Q8IUC4 686 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 FANCBQ8NB91 859 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 CCDC12Q8WUD4 166 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 FAM3CQ92520 227 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 MAP4K1Q92918 833 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 PGBD1Q96JS3 809 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 NLRP4Q96MN2 994 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 SSBP3Q9BWW4 388 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 LSM14BQ9BX40 385 aaKnown RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 MEGF9Q9H1U4 602 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 BRD9Q9H8M2 597 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 RXFP3Q9NSD7 469 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 SUCLA2Q9P2R7 463 aaPredicted RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 NDRG2Q9UN36 371 aaKnown RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 EML5Q05BV3 1969 aa6.54□□□□□ -1.36
CRNDE-207ENST00000559598 SETXQ7Z333 2677 aaKnown RBP6.54□□□□□ -1.36
CRNDE-207ENST00000559598 hCG_1642624A0A1W2PR95 340 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 PRC1O43663 620 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 AKAP3O75969 853 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms