RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZBTB16Q05516 673 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 SCAPQ12770 1279 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 MPP7Q5T2T1 576 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 SETD7Q8WTS6 366 aaKnown RBP13.64□□□□□ -0.23
TPM1-220ENST00000559556 SNX19Q92543 992 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 TMA16Q96EY4 203 aaKnown RBP13.64□□□□□ -0.23
TPM1-220ENST00000559556 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 TOR4AQ9NXH8 423 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 ATP6V1DQ9Y5K8 247 aa13.64□□□□□ -0.23
TPM1-220ENST00000559556 ANKRD36A6QL64 1941 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 A0A1B0GVT2 93 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 SEMA4FO95754 770 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 PAEPP09466 180 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 DLDP09622 509 aaKnown RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 GRIA4P48058 902 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 CSNK1EP49674 416 aaKnown RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 RPS14P62263 151 aaKnown RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 FKBP3Q00688 224 aaKnown RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 PNOCQ13519 176 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 TTC31Q49AM3 519 aaPredicted RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 FAM133BQ5BKY9 247 aaKnown RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 ZNF658Q5TYW1 1059 aaPredicted RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 PIK3R6Q5UE93 754 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 MBLAC2Q68D91 279 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 LCLAT1Q6UWP7 414 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 ZNF557Q8N988 423 aaPredicted RBP13.63□□□□□ -0.23
TPM1-220ENST00000559556 UBA3Q8TBC4 463 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 IRGQQ8WZA9 623 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 CDC6Q99741 560 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 TSG101Q99816 390 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 TM9SF3Q9HD45 589 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 PRSS16Q9NQE7 514 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 KIAA1257Q9ULG3 409 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 GPSM3Q9Y4H4 160 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 COL6A6A6NMZ7 2263 aa13.63□□□□□ -0.23
TPM1-220ENST00000559556 IRAK2O43187 625 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 GABBR2O75899 941 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 LTFP02788 710 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 DNTTP04053 509 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 ATP5BP06576 529 aaKnown RBP13.62□□□□□ -0.23
TPM1-220ENST00000559556 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 COL9A2Q14055 689 aaPredicted RBP13.62□□□□□ -0.23
TPM1-220ENST00000559556 TEAD4Q15561 434 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 NUGGCQ68CJ6 796 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 RFWD3Q6PCD5 774 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 UNC45BQ8IWX7 931 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
TPM1-220ENST00000559556 SPATA20Q8TB22 786 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 SLC35F5Q8WV83 523 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 TFAP2BQ92481 460 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 IGSF8Q969P0 613 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 AZIN2Q96A70 460 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 BIRC7Q96CA5 298 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 MYO19Q96H55 970 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 LMLNQ96KR4 655 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 GSDMAQ96QA5 445 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 BTBD1Q9H0C5 482 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
TPM1-220ENST00000559556 SGK2Q9HBY8 427 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 ARMCX3Q9UH62 379 aaPredicted RBP13.62□□□□□ -0.23
TPM1-220ENST00000559556 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.62□□□□□ -0.23
TPM1-220ENST00000559556 BTBD3Q9Y2F9 522 aa13.62□□□□□ -0.23
TPM1-220ENST00000559556 FLNBO75369 2602 aaKnown RBP13.62□□□□□ -0.23
TPM1-220ENST00000559556 PMM2O15305 246 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 TBL1XO60907 577 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 ATXN1LP0C7T5 689 aaKnown RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 LCP1P13796 627 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 POLR2EP19388 210 aaKnown RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 CD27P26842 260 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 SLC6A4P31645 630 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 CD70P32970 193 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 SLC11A2P49281 568 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 FMO5P49326 533 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 PMS1P54277 932 aaKnown RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 STILQ15468 1287 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 ZNF776Q68DI1 518 aaPredicted RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 ANKRD40Q6AI12 368 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 PMF1Q6P1K2 205 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 USP30Q70CQ3 517 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 TMPRSS7Q7RTY8 843 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 RHBDD1Q8TEB9 315 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 PRICKLE1Q96MT3 831 aaPredicted RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 ORAI3Q9BRQ5 295 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 RSPH9Q9H1X1 276 aaPredicted RBP13.61□□□□□ -0.23
TPM1-220ENST00000559556 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 DKK4Q9UBT3 224 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 SCML1Q9UN30 329 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 ANKRD6Q9Y2G4 727 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 SNX11Q9Y5W9 270 aa13.61□□□□□ -0.23
TPM1-220ENST00000559556 TRIM49BA6NDI0 452 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 ACSL4O60488 711 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms