RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 PLA2G4CQ9UP65 541 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 CKAP5Q14008 2032 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 TNRC6BQ9UPQ9 1833 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 TYW5A2RUC4 315 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 TM4SF5O14894 197 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 ERBB2P04626 1255 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 ATP5BP06576 529 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 C7P10643 843 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 SLC2A3P11169 496 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 CD70P32970 193 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 RPS24P62847 133 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 SLC6A3Q01959 620 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 KRT31Q15323 416 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 ST3GAL2Q16842 350 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 PTPRNQ16849 979 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 PEAR1Q5VY43 1037 aaPredicted RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 OR6B2Q6IFH4 312 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 KIAA1324Q6UXG2 1013 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 FAM183BPQ6ZVS7 135 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 SLC26A9Q7LBE3 791 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 ZDHHC17Q8IUH5 632 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 MFN1Q8IWA4 741 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 TMEM35BQ8NCS4 154 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 DDX1Q92499 740 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 VPS16Q9H269 839 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 TMEM245Q9H330 911 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 ITM2CQ9NQX7 267 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 STIM2Q9P246 746 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 USP36Q9P275 1121 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 SLC12A6Q9UHW9 1150 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 XPO7Q9UIA9 1087 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 PILRBQ9UKJ0 227 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 CYP8B1Q9UNU6 501 aa16.06■□□□□ 0.16
CSHL1-208ENST00000558609 MAP1BP46821 2468 aaKnown RBP16.06■□□□□ 0.16
CSHL1-208ENST00000558609 LAMA1P25391 3075 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 LNP1A1A4G5 178 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 PATE3B3GLJ2 98 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 GRAP2O75791 330 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 MBD3O95983 291 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 EPHX1P07099 455 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 TPM2P07951 284 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 DLDP09622 509 aaKnown RBP16.05■□□□□ 0.16
CSHL1-208ENST00000558609 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
CSHL1-208ENST00000558609 TACR2P21452 398 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 HOXD12P35452 270 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 COPAP53621 1224 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 CAMK2GQ13555 558 aaPredicted RBP16.05■□□□□ 0.16
CSHL1-208ENST00000558609 FNDC3BQ53EP0 1204 aaKnown RBP16.05■□□□□ 0.16
CSHL1-208ENST00000558609 PPM1JQ5JR12 505 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 LGI2Q8N0V4 545 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 ATP6V0D2Q8N8Y2 350 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 CYB5D2Q8WUJ1 264 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 TTC17Q96AE7 1141 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 ZNF419Q96HQ0 510 aaPredicted RBP16.05■□□□□ 0.16
CSHL1-208ENST00000558609 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 GANQ9H2C0 597 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 FAM204AQ9H8W3 233 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 CD93Q9NPY3 652 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 TMEM74BQ9NUR3 256 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 DDIT4Q9NX09 232 aa16.05■□□□□ 0.16
CSHL1-208ENST00000558609 USP24Q9UPU5 2620 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CEP192Q8TEP8 1941 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 F8VZ95 297 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 DAB1O75553 588 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 LUC7L3O95232 432 aaKnown RBP16.04■□□□□ 0.16
CSHL1-208ENST00000558609 HLA-EP13747 358 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 ITPKAP23677 461 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CD6P30203 668 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CCR1P32246 355 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 NOS2P35228 1153 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 GABRB2P47870 512 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 IRX4P78413 519 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 ZNF33AQ06730 810 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 LMAN2Q12907 356 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 MTA1Q13330 715 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 STX1AQ16623 288 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CCDC183Q5T5S1 534 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 RAP1GAP2Q684P5 730 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CHSY1Q86X52 802 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CCDC117Q8IWD4 279 aaPredicted RBP16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CFAP52Q8N1V2 620 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CARNMT1Q8N4J0 409 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 DEFB119Q8N690 84 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 PRCCQ92733 491 aaPredicted RBP16.04■□□□□ 0.16
CSHL1-208ENST00000558609 SIPA1Q96FS4 1042 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 PRMT1Q99873 361 aaKnown RBP16.04■□□□□ 0.16
CSHL1-208ENST00000558609 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms