RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 NR6A1Q15406 480 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 CCDC153Q494R4 210 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 FGD3Q5JSP0 725 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 STX12Q86Y82 276 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 HPS1Q92902 700 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 NSMCE2Q96MF7 247 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TOR4AQ9NXH8 423 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 CROTQ9UKG9 612 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 VAV3Q9UKW4 847 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 R3HDM2Q9Y2K5 976 aaKnown RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 CHURC1-FNTBB4DL54 471 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 ADM5C9JUS6 153 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 PROCP04070 461 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TMEM132BQ14DG7 1078 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 ZIK1Q3SY52 487 aaPredicted RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 TMED8Q6PL24 325 aaPredicted RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 PROSER1Q86XN7 944 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 CYP4Z2PQ8N1L4 340 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TBCDQ9BTW9 1192 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 NUAK2Q9H093 628 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 DYRK1BQ9Y463 629 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 DCDC2CA8MYV0 355 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 MYL12BO14950 172 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 BUD23O43709 281 aaKnown RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 CAMTA2O94983 1202 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 PLK1P53350 603 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 TFDP3Q5H9I0 405 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 SLFN11Q7Z7L1 901 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 CROCCP3Q8IVE0 287 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 MFSD1Q9H3U5 465 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 DSEQ9UL01 958 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 RWDD3Q9Y3V2 267 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 IGSF9BQ9UPX0 1349 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 TM9SF1O15321 606 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 SASH3O75995 380 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 FNDC3BQ53EP0 1204 aaKnown RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 IRGCQ6NXR0 463 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 CYP4X1Q8N118 509 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 GRIN3AQ8TCU5 1115 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 CITED4Q96RK1 184 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 TMEM39AQ9NV64 488 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 PSMG1O95456 288 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 LDLRP01130 860 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 ANTXR2P58335 489 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 MYL6P60660 151 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 HDAC7Q8WUI4 952 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 COL26A1Q96A83 441 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 CCDC154A6NI56 674 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 FAM220BPB1ANY3 271 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 MAGEB2O15479 319 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 DCXO43602 365 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 RNASEH1O60930 286 aaKnown RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 UMPSP11172 480 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 ACADSBP45954 432 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 PYDC2Q56P42 97 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 DHRSXQ8N5I4 330 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 POLLQ9UGP5 575 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 PLA2G4CQ9UP65 541 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 SSNA1O43805 119 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 CDH8P55286 799 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 ANKRD13AQ8IZ07 590 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 BPIFB6Q8NFQ5 453 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 STN1Q9H668 368 aaKnown RBP14.25□□□□□ -0.13
SPG11-210ENST00000558319 GPAMQ9HCL2 828 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 OVOS2A0A0G2JMS6 1433 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 OVOS2A0A0J9YW53 1432 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 OVOS2Q6IE36 1432 aa14.25□□□□□ -0.13
SPG11-210ENST00000558319 PNMA8CA0A1B0GUJ8 204 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 EME2A4GXA9 379 aaPredicted RBP14.24□□□□□ -0.13
SPG11-210ENST00000558319 EPHX2P34913 555 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 MARSP56192 900 aaKnown RBP14.24□□□□□ -0.13
SPG11-210ENST00000558319 SEMA3FQ13275 785 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 FAM171A1Q5VUB5 890 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 MTSS1LQ765P7 747 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 PLEKHH3Q7Z736 793 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 LPAR1Q92633 364 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 GBA2Q9HCG7 927 aaPredicted RBP14.24□□□□□ -0.13
SPG11-210ENST00000558319 CCDC182A6NF36 153 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 GPR182O15218 404 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 RGS20O76081 388 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 KRT6AP02538 564 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 MAGP20916 626 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 TKTL1P51854 596 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 CCNG1P51959 295 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 CHN2P52757 468 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 AP5B1Q2VPB7 878 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 EDRF1Q3B7T1 1238 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 SPOCD1Q6ZMY3 1216 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 SNX32Q86XE0 403 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
SPG11-210ENST00000558319 MAGEE2Q8TD90 523 aaPredicted RBP14.24□□□□□ -0.13
SPG11-210ENST00000558319 APOL4Q9BPW4 351 aa14.24□□□□□ -0.13
SPG11-210ENST00000558319 MRPS7Q9Y2R9 242 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms