RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SMYD3Q9H7B4 428 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ERVMER34-1Q9H9K5 563 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 NMUR1Q9HB89 426 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CPNE5Q9HCH3 593 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 PNPLA8Q9NP80 782 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 PRSS16Q9NQE7 514 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 NPDC1Q9NQX5 325 aaPredicted RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 FBXL12Q9NXK8 326 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 IL17BQ9UHF5 180 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 RASAL2Q9UJF2 1139 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 AGO1Q9UL18 857 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 CLEC4EQ9ULY5 219 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 SRPRBQ9Y5M8 271 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 SLC12A8A0AV02 714 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 HHLA1C9JL84 531 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CLIC2O15247 247 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 EIF3DO15371 548 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPG11-208ENST00000558155 KIF20AO95235 890 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 C4BPAP04003 597 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 WNT1P04628 370 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CENPBP07199 599 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 DLDP09622 509 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 SLFN14P0C7P3 912 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 GJB2P29033 226 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 EPHA8P29322 1005 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 HLA-FP30511 346 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 GGCXP38435 758 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 LSSP48449 732 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CYP2J2P51589 502 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 KIF11P52732 1056 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 NDST1P52848 882 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 ST8SIA6P61647 398 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 DAB2P98082 770 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 AMPD3Q01432 767 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 EFEMP1Q12805 493 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 ZNF211Q13398 564 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 NCOA4Q13772 614 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 KMT5BQ4FZB7 885 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 SGO2Q562F6 1265 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 MBLAC2Q68D91 279 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 NCEH1Q6PIU2 408 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 BLOC1S3Q6QNY0 202 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 XKR5Q6UX68 686 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 TREML4Q6UXN2 200 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 LIAT1Q6ZQX7 453 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CLEC20AQ6ZU45 233 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 RSRC2Q7L4I2 434 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 CCDC186Q7Z3E2 898 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 SCD5Q86SK9 330 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 PRPF39Q86UA1 669 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 AHI1Q8N157 1196 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 ZNF366Q8N895 744 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 ZNF557Q8N988 423 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 C12orf29Q8N999 325 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 MFSD2AQ8NA29 543 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 OR2T34Q8NGX1 318 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CYB5D2Q8WUJ1 264 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 SNRNP27Q8WVK2 155 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 TAF4BQ92750 862 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 JAKMIP2Q96AA8 810 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CCDC97Q96F63 343 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 P2RY11Q96G91 374 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 HIC2Q96JB3 615 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 SERAC1Q96JX3 654 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 SLC6A18Q96N87 628 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 DEPDC7Q96QD5 511 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 OMDQ99983 421 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 DUSP16Q9BY84 665 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 FGFBP2Q9BYJ0 223 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 SEMA4CQ9C0C4 833 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 ABCG4Q9H172 646 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 RSPH9Q9H1X1 276 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 NEUROG2Q9H2A3 272 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 PABPC3Q9H361 631 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 THSD1Q9NS62 852 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 FAM49BQ9NUQ9 324 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 MARCH2Q9P0N8 246 aa5.41□□□□□ -1.54
SPG11-208ENST00000558155 CGNQ9P2M7 1197 aaKnown RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 HEMK1Q9Y5R4 338 aaPredicted RBP5.41□□□□□ -1.54
SPG11-208ENST00000558155 ASH1LQ9NR48 2969 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 TP53BP1Q12888 1972 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 LAMA5O15230 3695 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TDRD6O60522 2096 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 NBEAQ8NFP9 2946 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3DA0A087WVF3 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3IA0A087WXS9 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3EA0A087X179 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3KA0A087X1G2 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 A0A1W2PR77 199 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TARSL2A2RTX5 802 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3FA6NER0 549 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3LB9A6J9 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PYCARD-AS1I3L0S3 204 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 ST8SIA5O15466 376 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TGFB1I1O43294 461 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 EXOC3O60645 756 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 USP12O75317 370 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 RNASEH2AO75792 299 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 DXOO77932 396 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 MPOP05164 745 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms