RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KCNT1Q5JUK3 1230 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 RABGAP1LQ5R372 815 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 FBXL22Q6P050 247 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 PYROXD2Q8N2H3 581 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 HJURPQ8NCD3 748 aaPredicted RBP21.98■■□□□ 1.11
CASC4-204ENST00000557945 HSPH1Q92598 858 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 PRICKLE1Q96MT3 831 aaPredicted RBP21.98■■□□□ 1.11
CASC4-204ENST00000557945 MARK1Q9P0L2 795 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 STIM2Q9P246 746 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 OR12D3Q9UGF7 316 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 PYCARDQ9ULZ3 195 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 PIAS3Q9Y6X2 628 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 GFRA2O00451 464 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 HOXC11O43248 304 aaPredicted RBP21.97■■□□□ 1.11
CASC4-204ENST00000557945 TYRP14679 529 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 GJA4P35212 333 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 RPS24P62847 133 aaKnown RBP21.97■■□□□ 1.11
CASC4-204ENST00000557945 ZXDAP98168 799 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 ZFYVE27Q5T4F4 411 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 IER5LQ5T953 404 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 TXNRD3NBQ6F5E7 133 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 ZNF662Q6ZS27 426 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 CYP4V2Q6ZWL3 525 aaPredicted RBP21.97■■□□□ 1.11
CASC4-204ENST00000557945 RNF10Q8N5U6 811 aaKnown RBP21.97■■□□□ 1.11
CASC4-204ENST00000557945 NAT16Q8N8M0 369 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 KIAA1524Q8TCG1 905 aa21.97■■□□□ 1.11
CASC4-204ENST00000557945 IRX2Q9BZI1 471 aaPredicted RBP21.97■■□□□ 1.11
CASC4-204ENST00000557945 TICRRQ7Z2Z1 1910 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 GRID2IPA4D2P6 1211 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 E9PAM4 449 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 PENKP01210 267 aaPredicted RBP21.96■■□□□ 1.11
CASC4-204ENST00000557945 RARAP10276 462 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 AMPD2Q01433 879 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 CA9Q16790 459 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 FYB2Q5VWT5 728 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 PSTKQ8IV42 348 aaKnown RBP21.96■■□□□ 1.11
CASC4-204ENST00000557945 TEKT4Q8WW24 435 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 IGSF8Q969P0 613 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 P2RY11Q96G91 374 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 XPO6Q96QU8 1125 aaKnown RBP21.96■■□□□ 1.11
CASC4-204ENST00000557945 C8orf33Q9H7E9 229 aaPredicted RBP21.96■■□□□ 1.11
CASC4-204ENST00000557945 TRMT1Q9NXH9 659 aaKnown RBP21.96■■□□□ 1.11
CASC4-204ENST00000557945 WNT16Q9UBV4 365 aa21.96■■□□□ 1.11
CASC4-204ENST00000557945 MYOFQ9NZM1 2061 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 SPECC1L-ADORA2AF8WAN1 911 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 FAM72CH0Y354 149 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 DCXO43602 365 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 CREB3O43889 395 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 PALMO75781 387 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 KRT7P08729 469 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 L1CAMP32004 1257 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 MLF2Q15773 248 aaPredicted RBP21.95■■□□□ 1.1
CASC4-204ENST00000557945 PPP6R3Q5H9R7 873 aaPredicted RBP21.95■■□□□ 1.1
CASC4-204ENST00000557945 FAM72AQ5TYM5 149 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 FAM72DQ6L9T8 149 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 RWDD4Q6NW29 188 aaKnown RBP21.95■■□□□ 1.1
CASC4-204ENST00000557945 TPRG1Q6ZUI0 275 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 FAM72BQ86X60 149 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 CIR1Q86X95 450 aaPredicted RBP21.95■■□□□ 1.1
CASC4-204ENST00000557945 EPAS1Q99814 870 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 ARHGEF3Q9NR81 526 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.95■■□□□ 1.1
CASC4-204ENST00000557945 CAPN6Q9Y6Q1 641 aa21.95■■□□□ 1.1
CASC4-204ENST00000557945 LRIG2O94898 1065 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 GLULP15104 373 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 HOXD9P28356 352 aaPredicted RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 CTHP32929 405 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 NRG1Q02297 640 aaPredicted RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 KRT81Q14533 505 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 GAB4Q2WGN9 574 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 ATP13A4Q4VNC1 1196 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 MPP7Q5T2T1 576 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 TTC39BQ5VTQ0 682 aaPredicted RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 RALGPS2Q86X27 583 aaPredicted RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 CCDC117Q8IWD4 279 aaPredicted RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 RHOT1Q8IXI2 618 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 ZNF683Q8IZ20 524 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 SYCE1Q8N0S2 351 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 KCTD15Q96SI1 283 aaPredicted RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 DNAJC17Q9NVM6 304 aaKnown RBP21.94■■□□□ 1.1
CASC4-204ENST00000557945 KLHL11Q9NVR0 708 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 NCOR1O75376 2440 aa21.94■■□□□ 1.1
CASC4-204ENST00000557945 CACNG3O60359 315 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 SLC6A11P48066 632 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 IRAK1P51617 712 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 NAIF1Q69YI7 327 aaPredicted RBP21.93■■□□□ 1.1
CASC4-204ENST00000557945 C12orf40Q86WS4 652 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 REXO1L1PQ8IX06 675 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 SIX5Q8N196 739 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 CARNMT1Q8N4J0 409 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 LRRC57Q8N9N7 239 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 TBC1D31Q96DN5 1066 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 ZYG11BQ9C0D3 744 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 MPP6Q9NZW5 540 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 VCANP13611 3396 aa21.93■■□□□ 1.1
CASC4-204ENST00000557945 DRGXA6NNA5 263 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 EEF2KO00418 725 aaKnown RBP21.92■■□□□ 1.1
CASC4-204ENST00000557945 TULP3O75386 442 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 CNTN5O94779 1100 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 CDH6P55285 790 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms