RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SPINK2P20155 84 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 GNA15P30679 374 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 CD70P32970 193 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 RPL34P49207 117 aaKnown RBP15.19■□□□□ 0.02
SHMT2-235ENST00000557740 ST8SIA6P61647 398 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 SLC14A1Q13336 389 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 CDH18Q13634 790 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 PTPRNQ16849 979 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 TTC31Q49AM3 519 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-235ENST00000557740 UNQ6494/PRO21346Q6UXR6 183 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 KIAA0907Q7Z7F0 614 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-235ENST00000557740 TAC4Q86UU9 113 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 ADAM32Q8TC27 787 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 DNASE2BQ8WZ79 361 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 FCRL2Q96LA5 508 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-235ENST00000557740 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-235ENST00000557740 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 PCED1AQ9H1Q7 454 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 RWDD2AQ9UIY3 292 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 NAALADL1Q9UQQ1 740 aa15.19■□□□□ 0.02
SHMT2-235ENST00000557740 PCDH15Q96QU1 1955 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 METTL12A8MUP2 240 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 E5RJQ4 531 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 BCAT2O15382 392 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 DNTTP04053 509 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 RDXP35241 583 aaKnown RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 USP8P40818 1118 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 RPS24P62847 133 aaKnown RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 ZBTB16Q05516 673 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 HNRNPDQ14103 355 aaKnown RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 CAMK4Q16566 473 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 ZNF776Q68DI1 518 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 TRIM65Q6PJ69 517 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 CARNMT1Q8N4J0 409 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 STK32AQ8WU08 396 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 MED15Q96RN5 788 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 CRACR2AQ9BSW2 395 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 SCNM1Q9BWG6 230 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 SLC4A5Q9BY07 1137 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 NUCKS1Q9H1E3 243 aaKnown RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 PRSS16Q9NQE7 514 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 KIAA1468Q9P260 1216 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
SHMT2-235ENST00000557740 EIF2B4Q9UI10 523 aaKnown RBP15.18■□□□□ 0.02
SHMT2-235ENST00000557740 CKAP5Q14008 2032 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 IGF2RP11717 2491 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 CER1O95813 267 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 TOP3BO95985 862 aaKnown RBP15.17■□□□□ 0.02
SHMT2-235ENST00000557740 ASLP04424 464 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 FYNP06241 537 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 PROS1P07225 676 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 CD59P13987 128 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 UBE2HP62256 183 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 PDCLQ13371 301 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 MS4A13Q5J8X5 152 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 GBP6Q6ZN66 633 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 BEND5Q7L4P6 421 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 CHSY1Q86X52 802 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 FIBINQ8TAL6 211 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 ZNF606Q8WXB4 792 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 SLC39A13Q96H72 371 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 POPDC2Q9HBU9 364 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 TJP2Q9UDY2 1190 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 WASF3Q9UPY6 502 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 CEP83Q9Y592 693 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 PCDHB9Q9Y5E1 797 aa15.17■□□□□ 0.02
SHMT2-235ENST00000557740 CEP192Q8TEP8 1941 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 C1QTNF9BB2RNN3 333 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 H0Y626 953 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 PAPSS1O43252 624 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 HYAL3O43820 417 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 GJB3O75712 270 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 TRIM16O95361 564 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 MOCS3O95396 460 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 SEMA4FO95754 770 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 C1QTNF9P0C862 333 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 CSKP41240 450 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 RPS14P62263 151 aaKnown RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 YWHAZP63104 245 aaKnown RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 ARHGAP44Q17R89 818 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 EXOC3L4Q17RC7 722 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 ZC3H12AQ5D1E8 599 aaKnown RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 SYPL2Q5VXT5 272 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 GJB7Q6PEY0 223 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 IL27RAQ6UWB1 636 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 NAXDQ8IW45 347 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 LGI2Q8N0V4 545 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 GANCQ8TET4 914 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 MYEOVQ96EZ4 313 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 BTBD1Q9H0C5 482 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 C6orf106Q9H6K1 298 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 FAM204AQ9H8W3 233 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 ACP6Q9NPH0 428 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 APEX2Q9UBZ4 518 aa15.16■□□□□ 0.02
SHMT2-235ENST00000557740 CYTH4Q9UIA0 394 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms