RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FAM193AP78312 1265 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 GRIK2Q13002 908 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 FAM133BQ5BKY9 247 aaKnown RBP16.51■□□□□ 0.23
TUBB3-213ENST00000557262 CACUL1Q86Y37 369 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 ZCCHC9Q8N567 271 aaKnown RBP16.51■□□□□ 0.23
TUBB3-213ENST00000557262 ZNF366Q8N895 744 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 FIBINQ8TAL6 211 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 WFDC5Q8TCV5 224 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-213ENST00000557262 PRSS16Q9NQE7 514 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 ST7Q9NRC1 585 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 STIM2Q9P246 746 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 NEUROG3Q9Y4Z2 214 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 PCDHB9Q9Y5E1 797 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 TMEM8BA6NDV4 472 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 SART1O43290 800 aaKnown RBP16.5■□□□□ 0.23
TUBB3-213ENST00000557262 ZBTB16Q05516 673 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 PAK1Q13153 545 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 NNTQ13423 1086 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 TRIP6Q15654 476 aaKnown RBP16.5■□□□□ 0.23
TUBB3-213ENST00000557262 NADSYN1Q6IA69 706 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 HJURPQ8NCD3 748 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-213ENST00000557262 C1orf216Q8TAB5 229 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 STK32AQ8WU08 396 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 GATA6Q92908 595 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 TTC17Q96AE7 1141 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 FCRL2Q96LA5 508 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-213ENST00000557262 CAMK1GQ96NX5 476 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 SERPINB11Q96P15 392 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
TUBB3-213ENST00000557262 UBE2TQ9NPD8 197 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-213ENST00000557262 NAALADL1Q9UQQ1 740 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 MSRB2Q9Y3D2 182 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 CKAP5Q14008 2032 aa16.5■□□□□ 0.23
TUBB3-213ENST00000557262 TYW5A2RUC4 315 aaKnown RBP16.49■□□□□ 0.23
TUBB3-213ENST00000557262 MED7O43513 233 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 GADD45BO75293 160 aaPredicted RBP16.49■□□□□ 0.23
TUBB3-213ENST00000557262 FGFR1OPO95684 399 aaKnown RBP16.49■□□□□ 0.23
TUBB3-213ENST00000557262 DNTTP04053 509 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 KRT5P13647 590 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 ACSL1P33121 698 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 RPS14P62263 151 aaKnown RBP16.49■□□□□ 0.23
TUBB3-213ENST00000557262 ZNF423Q2M1K9 1284 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 IL27RAQ6UWB1 636 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 BEND5Q7L4P6 421 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 DQX1Q8TE96 717 aaKnown RBP16.49■□□□□ 0.23
TUBB3-213ENST00000557262 FAM149B1Q96BN6 582 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 SLC39A13Q96H72 371 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 LMLNQ96KR4 655 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 SLC4A5Q9BY07 1137 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 BTBD1Q9H0C5 482 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 C6orf106Q9H6K1 298 aaPredicted RBP16.49■□□□□ 0.23
TUBB3-213ENST00000557262 GAREM1Q9H706 876 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 ZMIZ1Q9ULJ6 1067 aa16.49■□□□□ 0.23
TUBB3-213ENST00000557262 ASPMQ8IZT6 3477 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 FAM221BA6H8Z2 402 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 CAPN9O14815 690 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 LETM1O95202 739 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-213ENST00000557262 ASLP04424 464 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 ZNF883P0CG24 379 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 MATKP42679 507 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 ST8SIA6P61647 398 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 RPS24P62847 133 aaKnown RBP16.48■□□□□ 0.23
TUBB3-213ENST00000557262 MEA1Q16626 185 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 MS4A13Q5J8X5 152 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 SYPL2Q5VXT5 272 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 TMEM110Q86TL2 294 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 NAXDQ8IW45 347 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 CCDC117Q8IWD4 279 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-213ENST00000557262 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 ZNF606Q8WXB4 792 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 TRIM62Q9BVG3 475 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 KLK13Q9UKR3 277 aa16.48■□□□□ 0.23
TUBB3-213ENST00000557262 SEMA4FO95754 770 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 CER1O95813 267 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 CSNK1EP49674 416 aaKnown RBP16.47■□□□□ 0.23
TUBB3-213ENST00000557262 BNC1Q01954 994 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 HLA-BQ31612 363 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 ZNF776Q68DI1 518 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-213ENST00000557262 ENOSF1Q7L5Y1 443 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 CARNMT1Q8N4J0 409 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 ADAM32Q8TC27 787 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 SNX19Q92543 992 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 MYEOVQ96EZ4 313 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 MYO19Q96H55 970 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 FAM81BQ96LP2 452 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 PRICKLE1Q96MT3 831 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-213ENST00000557262 MED15Q96RN5 788 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
TUBB3-213ENST00000557262 IL21RQ9HBE5 538 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 SGK2Q9HBY8 427 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 OSGEPQ9NPF4 335 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 TM7SF3Q9NS93 570 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 INTS6Q9UL03 887 aaKnown RBP16.47■□□□□ 0.23
TUBB3-213ENST00000557262 SCML1Q9UN30 329 aa16.47■□□□□ 0.23
TUBB3-213ENST00000557262 NCKAP1Q9Y2A7 1128 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms