RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 BRCC3P46736 316 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 FANCCQ00597 558 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 SLC7A5Q01650 507 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 GPR17Q13304 367 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 PDGFRLQ15198 375 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 DPY19L1Q2PZI1 675 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF394Q53GI3 561 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 XKR9Q5GH70 373 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 XKR4Q5GH76 650 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 STXBP5Q5T5C0 1151 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 GPR158Q5T848 1215 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 LYSMD4Q5XG99 296 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ANO7Q6IWH7 933 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 APOA5Q6Q788 366 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 MOXD1Q6UVY6 613 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 GPR155Q7Z3F1 870 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 FAM124AQ86V42 546 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 CHD1LQ86WJ1 897 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 MICU3Q86XE3 530 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 RAB11FIP4Q86YS3 637 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 CMTM8Q8IZV2 173 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ARHGEF39Q8N4T4 335 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 MDGA1Q8NFP4 955 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 OR6P1Q8NGX9 317 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 PSMG2Q969U7 264 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 FAM20AQ96MK3 541 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ADPGKQ9BRR6 497 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 C22orf23Q9BZE7 217 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 TPSD1Q9BZJ3 242 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ZDHHC5Q9C0B5 715 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ZSWIM4Q9H7M6 989 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ECT2Q9H8V3 914 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 XPNPEP1Q9NQW7 623 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 PRMT7Q9NVM4 692 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-223ENST00000557076 WRAP73Q9P2S5 460 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-223ENST00000557076 HSFX1Q9UBD0 423 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 GULP1Q9UBP9 304 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-223ENST00000557076 PLXNB3Q9ULL4 1909 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 NUP205Q92621 2012 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CCDC196A0A1B0GTZ2 297 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 K7EQS6 105 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ACKR2O00590 384 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 PODXLO00592 558 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ZBTB43O43298 467 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 AP5Z1O43299 807 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 PRPF3O43395 683 aaKnown RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 SLITRK3O94933 977 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 LYPLA2O95372 231 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 VNN2O95498 520 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 PRKCBP05771 671 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF883P0CG24 379 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 XRCC6P12956 609 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 GLRA2P23416 452 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 RPL13P26373 211 aaKnown RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ITPKBP27987 946 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 GABRR2P28476 465 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 MARCKSP29966 332 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CDC25CP30307 473 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CSRP3P50461 194 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 RCAN1P53805 252 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 MRPS21P82921 87 aaKnown RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 NUCB1Q02818 461 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CAPSQ13938 189 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 EPHA7Q15375 998 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 FAM26FQ5R3K3 315 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 TRIM68Q6AZZ1 485 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CENPPQ6IPU0 288 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF280DQ6N043 979 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CC2D1AQ6P1N0 951 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 BORAQ6PGQ7 559 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 PCSK4Q6UW60 755 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 SLC36A4Q6YBV0 504 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ETV3LQ6ZN32 361 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ITIH5Q86UX2 942 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CPNE8Q86YQ8 564 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 NOSTRINQ8IVI9 506 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 NAXDQ8IW45 347 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 SMC5Q8IY18 1101 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 LGI4Q8N135 537 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 FRMD1Q8N878 549 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 TBCKQ8TEA7 893 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 RLN3Q8WXF3 142 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 USP13Q92995 863 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CD101Q93033 1021 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 CDC6Q99741 560 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 PDZD7Q9H5P4 517 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 FAM124BQ9H5Z6 455 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ANKEF1Q9NU02 776 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 TDP1Q9NUW8 608 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 SLC38A7Q9NVC3 462 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 MMP17Q9ULZ9 603 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 GDAQ9Y2T3 454 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 PCDHGB7Q9Y5F8 929 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 TICRRQ7Z2Z1 1910 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 THADAQ6YHU6 1953 aa5.11□□□□□ -1.59
SCFD1-223ENST00000557076 ABCA12Q86UK0 2595 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 C7orf72A4D263 438 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 OR6C75A6NL08 312 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 MATN3O15232 486 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms