RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SEPT10Q9P0V9 454 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 HESX1Q9UBX0 185 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 DCDC2Q9UHG0 476 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 MAGED2Q9UNF1 606 aaPredicted RBP11.71□□□□□ -0.54
SRP54-213ENST00000556994 INPP5FQ9Y2H2 1132 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.548e-10■■■■■ 32.7
SRP54-213ENST00000556994 IGKV6-21A0A0C4DH24 114 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 GOLGA8QA0A0J9YX86 632 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 GOLGA8OA6NCC3 632 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 GOLGA8NF8WBI6 632 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 H3BNX3 289 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 HCRTO43612 131 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 COX4I1P13073 169 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 GOT1P17174 413 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 FOLH1Q04609 750 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
SRP54-213ENST00000556994 NAPRTQ6XQN6 538 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CCDC185Q8N715 623 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.54
SRP54-213ENST00000556994 MAPK15Q8TD08 544 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CDKL2Q92772 493 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 COPS5Q92905 334 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 KCTD15Q96SI1 283 aaPredicted RBP11.7□□□□□ -0.54
SRP54-213ENST00000556994 GPR20Q99678 358 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CYP3A43Q9HB55 503 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 DNAJC28Q9NX36 388 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 TNFSF13BQ9Y275 285 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 TBC1D30Q9Y2I9 924 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 AIM2O14862 343 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 MDM4O15151 490 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 P4HA1P13674 534 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CNTFP26441 200 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 SERPINB5P36952 375 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 PHKA2P46019 1235 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 ATXN3P54252 364 aaPredicted RBP11.7□□□□□ -0.54
SRP54-213ENST00000556994 BTKQ06187 659 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 ICA1LQ8NDH6 482 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 NAT14Q8WUY8 206 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 HTR3CQ8WXA8 447 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 NCSTNQ92542 709 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CSPG4P5Q96PW8 444 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
SRP54-213ENST00000556994 SIKE1Q9BRV8 207 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 TMPRSS4Q9NRS4 437 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 AP4E1Q9UPM8 1137 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 PTPRFP10586 1907 aa11.7□□□□□ -0.54
SRP54-213ENST00000556994 CPA3P15088 417 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 PGGT1BP53609 377 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 TMEM132DQ14C87 1099 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 TLR1Q15399 786 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 DLG2Q15700 870 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 AMHR2Q16671 573 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 TREML2Q5T2D2 321 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 STXBP5Q5T5C0 1151 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 DCAF15Q66K64 600 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 STEAP4Q687X5 459 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 NCBP2-AS2Q69YL0 99 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 KBTBD6Q86V97 674 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 ACMSDQ8TDX5 336 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 FAM167AQ96KS9 214 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 C12orf42Q96LP6 360 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 OLFM3Q96PB7 478 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 QKIQ96PU8 341 aaKnown RBP eCLIP11.69□□□□□ -0.544e-9■■■■■ 35.8
SRP54-213ENST00000556994 LENG8Q96PV6 779 aaPredicted RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 OR52B2Q96RD2 323 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 TBCBQ99426 244 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 GCOM2Q9BZD3 368 aaPredicted RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 VCX3BQ9H321 246 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 STN1Q9H668 368 aaKnown RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 VCX3AQ9NNX9 186 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 DPP3Q9NY33 737 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 TXNDC16Q9P2K2 825 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 NME7Q9Y5B8 376 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 GJA3Q9Y6H8 435 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 A0A087WZ62 844 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 C19orf81C9J6K1 198 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 NEMP1O14524 444 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 DPYSL4O14531 572 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 PPEF2O14830 753 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 USP12O75317 370 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 PGK2P07205 417 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 PABPC4LP0CB38 370 aaKnown RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 LCP1P13796 627 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 GRK2P25098 689 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 PSMB4P28070 264 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 ATICP31939 592 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 CHN2P52757 468 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 MTTPP55157 894 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 IRF9Q00978 393 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 KLF10Q13118 480 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 DPYSL2Q16555 572 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 SLC5A9Q2M3M2 681 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms