RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 RNF43Q68DV7 783 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 EMC1Q8N766 993 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 JOSD2Q8TAC2 188 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 NT5C3BQ969T7 300 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 TRIM11Q96F44 468 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 CHP1Q99653 195 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 DEF6Q9H4E7 631 aa23.33■■□□□ 1.33
PABPN1-206ENST00000556809 FAM186AA6NE01 2351 aa23.33■■□□□ 1.32
PABPN1-206ENST00000556809 SYNJ2BP-COX16A0A087WUM0 186 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 SIGLEC16A6NMB1 481 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 M0QYT0 321 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 ACSL4O60488 711 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 APBB3O95704 486 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 CYBBP04839 570 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 HOXD9P28356 352 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 SLC6A4P31645 630 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 SRSF5Q13243 272 aaKnown RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 ASTE1Q2TB18 679 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 SLC25A52Q3SY17 297 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 OTUD1Q5VV17 481 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 NADSYN1Q6IA69 706 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 ALKBH5Q6P6C2 394 aaKnown RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 ZNF513Q8N8E2 541 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 DDI1Q8WTU0 396 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 SLC2A11Q9BYW1 496 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 IRX2Q9BZI1 471 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 COX16Q9P0S2 106 aa23.32■■□□□ 1.32
PABPN1-206ENST00000556809 SMG5Q9UPR3 1016 aaKnown RBP23.32■■□□□ 1.32
PABPN1-206ENST00000556809 GOLGA6L7A0A1B0GV03 622 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 C2CD4BA6NLJ0 364 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 ATMINO43313 823 aaPredicted RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 TSPAN3O60637 253 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 APOEP02649 317 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 MYBL1P10243 752 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 TFE3P19532 575 aaPredicted RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 SLC11A2P49281 568 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 SGSHP51688 502 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 DGKEP52429 567 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 GFPT1Q06210 699 aaPredicted RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 NME3Q13232 169 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 SLC18A3Q16572 532 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 ZC3H12AQ5D1E8 599 aaKnown RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 EOGTQ5NDL2 527 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 PPP1R15BQ5SWA1 713 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 CCDC122Q5T0U0 273 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 PIK3R6Q5UE93 754 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 RASSF3Q86WH2 238 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 RXFP2Q8WXD0 754 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 ZNF653Q96CK0 615 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 TMA16Q96EY4 203 aaKnown RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 PGAP3Q96FM1 320 aaPredicted RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 CFAP57Q96MR6 1250 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 TBCBQ99426 244 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 ADAM33Q9BZ11 813 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 NHEJ1Q9H9Q4 299 aaPredicted RBP23.31■■□□□ 1.32
PABPN1-206ENST00000556809 PARVAQ9NVD7 372 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 CALCOCO1Q9P1Z2 691 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 NENFQ9UMX5 172 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 GPR179Q6PRD1 2367 aa23.31■■□□□ 1.32
PABPN1-206ENST00000556809 AKR1B10O60218 316 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 PDGFRAP16234 1089 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 RFC1P35251 1148 aaPredicted RBP23.3■■□□□ 1.32
PABPN1-206ENST00000556809 GEN1Q17RS7 908 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 EGFLAMQ63HQ2 1017 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 PLEKHA7Q6IQ23 1121 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 TSTD1Q8NFU3 115 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 CCDC42Q96M95 316 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 MCEEQ96PE7 176 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 ACOX2Q99424 681 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.3■■□□□ 1.32
PABPN1-206ENST00000556809 IMPACTQ9P2X3 320 aa23.3■■□□□ 1.32
PABPN1-206ENST00000556809 CNOT8Q9UFF9 292 aaKnown RBP23.3■■□□□ 1.32
PABPN1-206ENST00000556809 ANKRD62A6NC57 917 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 GOLGA6L3A6NEY3 463 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 AXIN1O15169 862 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 F9P00740 461 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 SLC2A3P11169 496 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 ABCB4P21439 1286 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 GPD1P21695 349 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 SDC4P31431 198 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 CCR1P32246 355 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 DEUP1Q05D60 604 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 MAMLD1Q13495 774 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 SIM2Q14190 667 aaPredicted RBP23.29■■□□□ 1.32
PABPN1-206ENST00000556809 MPP7Q5T2T1 576 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 RFWD3Q6PCD5 774 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 DCUN1D2Q6PH85 259 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 TRMT11Q7Z4G4 463 aaKnown RBP23.29■■□□□ 1.32
PABPN1-206ENST00000556809 SPC24Q8NBT2 197 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 GAB3Q8WWW8 586 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 RUBCNQ92622 972 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 RNF34Q969K3 372 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 PANX2Q96RD6 677 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 GRPEL1Q9HAV7 217 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 CD248Q9HCU0 757 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 PIGVQ9NUD9 493 aa23.29■■□□□ 1.32
PABPN1-206ENST00000556809 MOCS2O96007 188 aaPredicted RBP23.28■■□□□ 1.32
PABPN1-206ENST00000556809 NTSR1P30989 418 aa23.28■■□□□ 1.32
PABPN1-206ENST00000556809 PTPN9P43378 593 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms