RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PIGVQ9NUD9 493 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNX6-208ENST00000556712 EBF1Q9UH73 591 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 GMEB2Q9UKD1 530 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 SNX10Q9Y5X0 201 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 STON1Q9Y6Q2 735 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 THADAQ6YHU6 1953 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 RALGAPA1Q6GYQ0 2036 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 FAM186AA6NE01 2351 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 TYW5A2RUC4 315 aaKnown RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 KCNU1A8MYU2 1149 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 I6L893 689 aaPredicted RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 ALDH1A2O94788 518 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 PABPC1P11940 636 aaKnown RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 UNGP13051 313 aaPredicted RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 HLA-EP13747 358 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 MMP8P22894 467 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 PRKCHP24723 683 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 GBP1P32455 592 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 CNR2P34972 360 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 FANCCQ00597 558 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 LMAN2Q12907 356 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 PTP4A2Q12974 167 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 ZNF234Q14588 700 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 CCDC6Q16204 474 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 CLEC16AQ2KHT3 1053 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 RAB6CQ53S08 254 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 FSCBQ5H9T9 825 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 ADIPOR2Q86V24 386 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 CACUL1Q86Y37 369 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNX6-208ENST00000556712 ATP6V0D2Q8N8Y2 350 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 MSANTD4Q8NCY6 345 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 JOSD2Q8TAC2 188 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 KCNV2Q8TDN2 545 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 AZIN2Q96A70 460 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 BTN2A3PQ96KV6 586 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 CFAP57Q96MR6 1250 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 PRMT1Q99873 361 aaKnown RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 DDX50Q9BQ39 737 aaKnown RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 SLC2A11Q9BYW1 496 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 RAB6CQ9H0N0 254 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 DUSP15Q9H1R2 295 aaPredicted RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■■□□□ 12.7
SNX6-208ENST00000556712 ELOVL2Q9NXB9 296 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 THAP10Q9P2Z0 257 aaPredicted RBP10.74□□□□□ -0.69
SNX6-208ENST00000556712 STAP1Q9ULZ2 295 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 CEP192Q8TEP8 1941 aa10.74□□□□□ -0.69
SNX6-208ENST00000556712 FRYLO94915 3013 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 F5H5T6 163 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 GOLGA6L19H0YKK7 550 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 PAGE1O75459 146 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 LUC7L3O95232 432 aaKnown RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 ADCY5O95622 1261 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 FERP16591 822 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 NDUFV2P19404 249 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 ABCB4P21439 1286 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 CCR1P32246 355 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 SCNN1AP37088 669 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 NSFP46459 744 aaKnown RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 TPM4P67936 248 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 ATP11AP98196 1134 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 DEUP1Q05D60 604 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 SPEM2Q0P670 501 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 CDH18Q13634 790 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 NR1I3Q14994 352 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 EIF4HQ15056 248 aaKnown RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 CDO1Q16878 200 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 C15orf59Q2T9L4 293 aaPredicted RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 PLK5Q496M5 336 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 FNDC3BQ53EP0 1204 aaKnown RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 MPP7Q5T2T1 576 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 MBLAC2Q68D91 279 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 SDE2Q6IQ49 451 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 ARMCX6Q7L4S7 300 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 KIAA0907Q7Z7F0 614 aaPredicted RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 C14orf80Q86SX3 495 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 DNAAF5Q86Y56 855 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 AHI1Q8N157 1196 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 WFIKKN2Q8TEU8 576 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 UCMAQ8WVF2 138 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 IGSF8Q969P0 613 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 LMLNQ96KR4 655 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 AGPAT1Q99943 283 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 TTYH3Q9C0H2 523 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 TKTL2Q9H0I9 626 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 SMOC1Q9H4F8 434 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 MBD1Q9UIS9 605 aaPredicted RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 TMEM59LQ9UK28 342 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 INTS6Q9UL03 887 aaKnown RBP10.73□□□□□ -0.69
SNX6-208ENST00000556712 VANGL2Q9ULK5 521 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 USP18Q9UMW8 372 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 HS3ST4Q9Y661 456 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 NUP205Q92621 2012 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 ABCA7Q8IZY2 2146 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 GVINP1Q7Z2Y8 2422 aa10.73□□□□□ -0.69
SNX6-208ENST00000556712 RIF1Q5UIP0 2472 aaKnown RBP10.72□□□□□ -0.69
SNX6-208ENST00000556712 A0A1W2PQC6 194 aa10.72□□□□□ -0.69
SNX6-208ENST00000556712 TMCO5BA8MYB1 307 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms