RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 HMX2A2RU54 273 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 FAM159BA6NKW6 160 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 LPXNO60711 386 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 CAPN15O75808 1086 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 DDHD2O94830 711 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 F7P08709 466 aaPredicted RBP10.42□□□□□ -0.74
TMEM260-211ENST00000556648 ALADP13716 330 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 PTPN3P26045 913 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 FDFT1P37268 417 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 SLC18A2Q05940 514 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 PDK1Q15118 436 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 FAM26DQ5JW98 314 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 OVOS1Q6IE37 1185 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 C4orf22Q6V702 233 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 OTOAQ7RTW8 1153 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 METTL23Q86XA0 190 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 FITM2Q8N6M3 262 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 GSDMBQ8TAX9 411 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 DQX1Q8TE96 717 aaKnown RBP10.42□□□□□ -0.74
TMEM260-211ENST00000556648 STAMBPL1Q96FJ0 436 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 OXNAD1Q96HP4 312 aaPredicted RBP10.42□□□□□ -0.74
TMEM260-211ENST00000556648 FAM111AQ96PZ2 611 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 ACBD6Q9BR61 282 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 SYBUQ9NX95 663 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 IL1RAPL1Q9NZN1 696 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 MSI1O43347 362 aaKnown RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 OPHN1O60890 802 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 DNAJC8O75937 253 aaPredicted RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TOMM70O94826 608 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TOP3BO95985 862 aaKnown RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 ETV4P43268 484 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CXCR3P49682 368 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 ACLYP53396 1101 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 NCALDP61601 193 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 ZBTB17Q13105 803 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 GALNTL6Q49A17 601 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CLLU1OSQ5K130 101 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TTC39BQ5VTQ0 682 aaPredicted RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 SDHAF4Q5VUM1 108 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 PM20D1Q6GTS8 502 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CES3Q6UWW8 571 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 LRRC6Q86X45 466 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CD99L2Q8TCZ2 262 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 C10orf82Q8WW14 230 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 ARNTL2Q8WYA1 636 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TTC17Q96AE7 1141 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 PGAP3Q96FM1 320 aaPredicted RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CELF6Q96J87 481 aaKnown RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 SUSD3Q96L08 255 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 SLC9A7Q96T83 725 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 COLEC11Q9BWP8 271 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 XAB2Q9HCS7 855 aaKnown RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 DMAP1Q9NPF5 467 aaPredicted RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 NEU3Q9UQ49 428 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 STARD13Q9Y3M8 1113 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 HTTP42858 3142 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 SHROOM3Q8TF72 1996 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TRDMT1O14717 391 aaKnown RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TM9SF1O15321 606 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 USP12O75317 370 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 RFPL1O75677 317 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 RASSF9O75901 435 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 LRIG2O94898 1065 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CKBP12277 381 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 GPR15P49685 360 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 OVGP1Q12889 678 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 STEAP4Q687X5 459 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 CASC4Q6P4E1 433 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 LRRC8BQ6P9F7 803 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 LRRC39Q96DD0 335 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 PGBD4Q96DM1 585 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 AGAP3Q96P47 875 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 KLHL8Q9P2G9 620 aaPredicted RBP10.41□□□□□ -0.74
TMEM260-211ENST00000556648 NUDT5Q9UKK9 219 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 TRIM33Q9UPN9 1127 aa10.41□□□□□ -0.74
TMEM260-211ENST00000556648 ZBTB24O43167 697 aaPredicted RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 STK10O94804 968 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 GSTA1P08263 222 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 GSTA2P09210 222 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 DHRS4L1P0CG22 281 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 BGNP21810 368 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 HNRNPH1P31943 449 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 CD68P34810 354 aaPredicted RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 CCNFP41002 786 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 SLC5A3P53794 718 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 SP3Q02447 781 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 NIPAL4Q0D2K0 466 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 SEPT7Q16181 437 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 MROH9Q5TGP6 573 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 CES4AQ5XG92 561 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 ARHGAP36Q6ZRI8 547 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 BZW1Q7L1Q6 419 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 PID1Q7Z2X4 250 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 OR52K1Q8NGK4 314 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 RFWD2Q8NHY2 731 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 ALKBH8Q96BT7 664 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 SRPK1Q96SB4 655 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 MLPHQ9BV36 600 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms