RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CC2D1AQ6P1N0 951 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CPLX2Q6PUV4 134 aaKnown RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 PIK3AP1Q6ZUJ8 805 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 USP37Q86T82 979 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 JAZF1Q86VZ6 243 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 SYT12Q8IV01 421 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CMTM8Q8IZV2 173 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 HDDC3Q8N4P3 179 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 TSTD1Q8NFU3 115 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 RPLP0P6Q8NHW5 317 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 PSMG2Q969U7 264 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 IFT74Q96LB3 600 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 ZMAT2Q96NC0 199 aaKnown RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 DHRS4Q9BTZ2 278 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 SLC46A2Q9BY10 475 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 EBF3Q9H4W6 596 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 NCOA5Q9HCD5 579 aaKnown RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 HPS4Q9NQG7 708 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 KLHL14Q9P2G3 628 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 HSFX1Q9UBD0 423 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 KCNJ14Q9UNX9 436 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 TNFSF13BQ9Y275 285 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 INVSQ9Y283 1065 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 PATJQ8NI35 1801 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 ZFYVE26Q68DK2 2539 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 NPHP3-ACAD11A0A0J9YXS1 232 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 M0QZQ0 153 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 DLX3O60479 287 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 ALDH1A2O94788 518 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 VNN2O95498 520 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 PRAMEF12O95522 483 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 EDN1P05305 212 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 ENGP17813 658 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 XBP1P17861 261 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 RPS6KB1P23443 525 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 DDX6P26196 483 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 PSMA5P28066 241 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 GJA4P35212 333 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 AVPR1AP37288 418 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 OSTNP61366 133 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 BYSLQ13895 437 aaKnown RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 SF1Q15637 639 aaKnown RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TAF12Q16514 161 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CALCRLQ16602 461 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 SLC35F1Q5T1Q4 408 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 ACBD5Q5T8D3 534 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 YOD1Q5VVQ6 348 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TRIM68Q6AZZ1 485 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 ARMCX5Q6P1M9 558 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 GALNT18Q6P9A2 607 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CCNI2Q6ZMN8 369 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 LPCAT2Q7L5N7 544 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CATSPER3Q86XQ3 398 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 JAMLQ86YT9 394 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TMEM145Q8NBT3 493 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 ATAD1Q8NBU5 361 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CEP76Q8TAP6 659 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 MZB1Q8WU39 189 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CD101Q93033 1021 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 C18orf25Q96B23 403 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CHFRQ96EP1 664 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 LRIG1Q96JA1 1093 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 JAKMIP1Q96N16 626 aaKnown RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 PGLYRP2Q96PD5 576 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 BBC3Q96PG8 261 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TCHPQ9BT92 498 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TTC12Q9H892 705 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TUFT1Q9NNX1 390 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 TIMM13Q9Y5L4 95 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 MYH15Q9Y2K3 1946 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 ASPMQ8IZT6 3477 aa5.22□□□□□ -1.57
ATXN3-239ENST00000556315 MYH9P35579 1960 aaKnown RBP5.22□□□□□ -1.57
ATXN3-239ENST00000556315 SDK1Q7Z5N4 2213 aa5.21□□□□□ -1.57
ATXN3-239ENST00000556315 ANKRD11Q6UB99 2663 aaPredicted RBP5.21□□□□□ -1.57
ATXN3-239ENST00000556315 MTCL1Q9Y4B5 1905 aaKnown RBP5.21□□□□□ -1.57
ATXN3-239ENST00000556315 MTMR11A4FU01 709 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ARHGEF35A5YM69 484 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 OPHN1O60890 802 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 MPOP05164 745 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 OR4Q2P0C623 313 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 MCF2P10911 925 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 PLS3P13797 630 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ARSAP15289 507 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 TYMPP19971 482 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 CYP3A5P20815 502 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 BCKDHBP21953 392 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 PAX3P23760 479 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 HSPA4P34932 840 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 HOXD12P35452 270 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 AARSP49588 968 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 FAM193AP78312 1265 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 CYP4F8P98187 520 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 GFPT1Q06210 699 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 CYP4F3Q08477 520 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 BFSP1Q12934 665 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms