RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SEMA3BQ13214 749 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 AUHQ13825 339 aaKnown RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CBX2Q14781 532 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CCDC85BQ15834 202 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 MS4A13Q5J8X5 152 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 PIK3R6Q5UE93 754 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 KAZNQ674X7 775 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 RAP1GAP2Q684P5 730 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 RWDD4Q6NW29 188 aaKnown RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 RFX8Q6ZV50 586 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 HTR3DQ70Z44 454 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CHSY1Q86X52 802 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 SLC13A5Q86YT5 568 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CREG2Q8IUH2 290 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 ARID3BQ8IVW6 561 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 MNS1Q8NEH6 495 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 SH3RF2Q8TEC5 729 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 FGF13Q92913 245 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 USP13Q92995 863 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 TBC1D31Q96DN5 1066 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 RNF157Q96PX1 679 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 SMG9Q9H0W8 520 aaKnown RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CWC15Q9P013 229 aaKnown RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 XPO7Q9UIA9 1087 aaKnown RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CDH22Q9UJ99 828 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 AGO1Q9UL18 857 aaKnown RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 CDH7Q9ULB5 785 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 SNX10Q9Y5X0 201 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 REV3LO60673 3130 aa11.4□□□□□ -0.59
TMEM260-208ENST00000555905 GOLGA6L10A0A0M3HER8 536 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 E9PAM4 449 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 F5H5T6 163 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 FAM72CH0Y354 149 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 FGF10O15520 208 aaPredicted RBP11.39□□□□□ -0.59
TMEM260-208ENST00000555905 LRIG2O94898 1065 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 KLKB1P03952 638 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 KRT10P13645 584 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 TCF3P15923 654 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 ZFXP17010 805 aaPredicted RBP11.39□□□□□ -0.59
TMEM260-208ENST00000555905 TACR2P21452 398 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 IL4RP24394 825 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 EPHB2P29323 1055 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 LLGL1Q15334 1064 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 ADGRF1Q5T601 910 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 FAM72AQ5TYM5 149 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 FAM72DQ6L9T8 149 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 Q6ZNB5 142 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 FAM72BQ86X60 149 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 CELF5Q8N6W0 485 aaKnown RBP11.39□□□□□ -0.59
TMEM260-208ENST00000555905 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 SMARCD2Q92925 531 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 FAF2Q96CS3 445 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 GUCD1Q96NT3 240 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 MAGEB5Q9BZ81 275 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 CATSPERBQ9H7T0 1116 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
TMEM260-208ENST00000555905 DONSONQ9NYP3 566 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 VANGL2Q9ULK5 521 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 CCL26Q9Y258 94 aa11.39□□□□□ -0.59
TMEM260-208ENST00000555905 ZFP37Q9Y6Q3 630 aaPredicted RBP11.39□□□□□ -0.59
TMEM260-208ENST00000555905 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 GOLGA6L7A0A1B0GV03 622 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-208ENST00000555905 KRIT1O00522 736 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 SLC9A3R1O14745 358 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-208ENST00000555905 APOL1O14791 398 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 CST8O60676 142 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 PRAMEF12O95522 483 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 KCNA5P22460 613 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 AMPD1P23109 780 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 GBP2P32456 591 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-208ENST00000555905 GGCXP38435 758 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 DYNLT1P63172 113 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 ZXDBP98169 803 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 USP4Q13107 963 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 DPYSQ14117 519 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 ZNF77Q15935 545 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 FAM133BQ5BKY9 247 aaKnown RBP11.38□□□□□ -0.59
TMEM260-208ENST00000555905 FAM78AQ5JUQ0 283 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 RABGAP1LQ5R372 815 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 MANEALQ5VSG8 457 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 NADSYN1Q6IA69 706 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 FBXL22Q6P050 247 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 BBS12Q6ZW61 710 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 ANKS1BQ7Z6G8 1248 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 ADAT2Q7Z6V5 191 aaKnown RBP11.38□□□□□ -0.59
TMEM260-208ENST00000555905 C14orf80Q86SX3 495 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 LGI2Q8N0V4 545 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 CEP112Q8N8E3 955 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 KIAA1958Q8N8K9 716 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 TTC13Q8NBP0 860 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 PCDH19Q8TAB3 1148 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 PPM1EQ8WY54 764 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 WBP2Q969T9 261 aa11.38□□□□□ -0.59
TMEM260-208ENST00000555905 E2F7Q96AV8 911 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms