RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 Q3C1V9 767 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 FASTKD1Q53R41 847 aaKnown RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 IRGCQ6NXR0 463 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 Q6ZNB5 142 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 STRADAQ7RTN6 431 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 CATSPER4Q7RTX7 472 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 RASSF3Q86WH2 238 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 PSTKQ8IV42 348 aaKnown RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 MPP5Q8N3R9 675 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 SCG3Q8WXD2 468 aaKnown RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 EMID1Q96A84 441 aaPredicted RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 ZNF333Q96JL9 665 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 SNX27Q96L92 541 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 ZNF560Q96MR9 790 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 R3HDMLQ9H3Y0 253 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 TUT1Q9H6E5 874 aaKnown RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 PLAC1Q9HBJ0 212 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 MOCS1Q9NZB8 636 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 DTLQ9NZJ0 730 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 KCNH4Q9UQ05 1017 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 APOBEC2Q9Y235 224 aaKnown RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 PCDHB3Q9Y5E6 796 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 GLTPD2A6NH11 291 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 RNF103O00237 685 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TPP1O14773 563 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 XPOTO43592 962 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 DGKIO75912 1065 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TM7SF2O76062 418 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 KLHL2O95198 593 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CD4P01730 458 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 POLBP06746 335 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CCDC130P13994 396 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 GOT1P17174 413 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MX2P20592 715 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 AMPD1P23109 780 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 GNL1P36915 607 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 PNPLA4P41247 253 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MATKP42679 507 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SULT1E1P49888 294 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SESN2P58004 480 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 IRX4P78413 519 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 IFRD2Q12894 506 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 SLC10A2Q12908 348 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 LBRQ14739 615 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 PCBP1Q15365 356 aaKnown RBP eCLIP7.19□□□□□ -1.26
TDP1-213ENST00000555880 SLC25A52Q3SY17 297 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MDH1BQ5I0G3 518 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 FBXO47Q5MNV8 452 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 GJC2Q5T442 439 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 N4BP2L1Q5TBK1 243 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 C1orf146Q5VVC0 180 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 BSPRYQ5W0U4 402 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 NCBP2-AS2Q69YL0 99 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 ANO7Q6IWH7 933 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 NOTUMQ6P988 496 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 LRRC8BQ6P9F7 803 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 BLOC1S3Q6QNY0 202 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 PACS1Q6VY07 963 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 ZCCHC23Q6ZST2 131 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 PDZD4Q76G19 769 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 ULK2Q8IYT8 1036 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CCDC33Q8N5R6 958 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CCDC185Q8N715 623 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 COLGALT1Q8NBJ5 622 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CCNYQ8ND76 341 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 RBM15BQ8NDT2 890 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 PIWIL2Q8TC59 973 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 DTX3LQ8TDB6 740 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 LRRN4Q8WUT4 740 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 WDR60Q8WVS4 1066 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TNIP3Q96KP6 325 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 HSFY1Q96LI6 401 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 OLFM3Q96PB7 478 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 C11orf84Q9BUA3 381 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 APOL6Q9BWW8 343 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 C1orf21Q9H246 121 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 XPNPEP3Q9NQH7 507 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 NDE1Q9NXR1 346 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SNTG2Q9NY99 539 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SEPT10Q9P0V9 454 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TUBGCP4Q9UGJ1 667 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 GTF2IRD1Q9UHL9 959 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 UBQLN1Q9UMX0 589 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 GINS2Q9Y248 185 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SF3B1O75533 1304 aaKnown RBP eCLIP7.19□□□□□ -1.264e-7■■■■■ 133.7
TDP1-213ENST00000555880 PDCD11Q14690 1871 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 PLXNB2O15031 1838 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 HMX2A2RU54 273 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 A6NHS1 94 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 F5H423 210 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 PPEF2O14830 753 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TLL1O43897 1013 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TBX10O75333 385 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SKAP2O75563 359 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 SERPINE1P05121 402 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 PDGFRBP09619 1106 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MYL4P12829 197 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TFE3P19532 575 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms