RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 EEF1GP26641 437 aaKnown RBP25.35■■□□□ 1.65
PRKCH-216ENST00000555542 HOXD12P35452 270 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 MAPK8P45983 427 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 RPS24P62847 133 aaKnown RBP25.35■■□□□ 1.65
PRKCH-216ENST00000555542 CDK17Q00537 523 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 TAF5Q15542 800 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 UAP1L1Q3KQV9 507 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 TCP11X2Q5H9J9 407 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 MS4A13Q5J8X5 152 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 EFHC1Q5JVL4 640 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 SYCP2LQ5T4T6 812 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 RABEPKQ7Z6M1 372 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 CHSY1Q86X52 802 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 LGI2Q8N0V4 545 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 CFAP52Q8N1V2 620 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 WDTC1Q8N5D0 677 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 ZNF366Q8N895 744 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 ATP6V0D2Q8N8Y2 350 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 CEP76Q8TAP6 659 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 LSM14BQ9BX40 385 aaKnown RBP25.35■■□□□ 1.65
PRKCH-216ENST00000555542 PLCB1Q9NQ66 1216 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 CKAP5Q14008 2032 aa25.35■■□□□ 1.65
PRKCH-216ENST00000555542 MEI4A8MW99 385 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 HSF2BPO75031 334 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 GRAP2O75791 330 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 TPM2P07951 284 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 GLI1P08151 1106 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 DLDP09622 509 aaKnown RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 CLCN1P35523 988 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 ATXN3P54252 364 aaPredicted RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 DRAP1Q14919 205 aaPredicted RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 DUOXA1Q1HG43 343 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 RAP1GAP2Q684P5 730 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 SMYD5Q6GMV2 418 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 C11orf57Q6ZUT1 292 aaPredicted RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 FAM183BPQ6ZVS7 135 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 METTL3Q86U44 580 aaKnown RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 SLC41A1Q8IVJ1 513 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 DEFB106AQ8N104 65 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 FOXJ1Q92949 421 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 TOE1Q96GM8 510 aaKnown RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 BTN2A3PQ96KV6 586 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 DDIT4Q9NX09 232 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 TAB2Q9NYJ8 693 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 USP36Q9P275 1121 aaKnown RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 XPO7Q9UIA9 1087 aaKnown RBP25.34■■□□□ 1.65
PRKCH-216ENST00000555542 FHOD1Q9Y613 1164 aa25.34■■□□□ 1.65
PRKCH-216ENST00000555542 H0Y626 953 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 TM4SF5O14894 197 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 ADRB1P08588 477 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 ABCB4P21439 1286 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 COPAP53621 1224 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 ST8SIA6P61647 398 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 SLC23A3Q6PIS1 610 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 KIAA0907Q7Z7F0 614 aaPredicted RBP25.33■■□□□ 1.65
PRKCH-216ENST00000555542 FAM71AQ8IYT1 594 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 OR2T3Q8NH03 318 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 FIBINQ8TAL6 211 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 GPR174Q9BXC1 333 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 ITM2CQ9NQX7 267 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.33■■□□□ 1.65
PRKCH-216ENST00000555542 ASNSD1Q9NWL6 643 aa25.33■■□□□ 1.65
PRKCH-216ENST00000555542 F5H5T6 163 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 ERBB2P04626 1255 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 SLC2A3P11169 496 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 ENGP17813 658 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 TACR2P21452 398 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 OXTRP30559 389 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 TPMTP51580 245 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 PITX1P78337 314 aaPredicted RBP25.32■■□□□ 1.64
PRKCH-216ENST00000555542 GFPT1Q06210 699 aaPredicted RBP25.32■■□□□ 1.64
PRKCH-216ENST00000555542 KCNMA1Q12791 1236 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 WDR45BQ5MNZ6 344 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 KLHDC7AQ5VTJ3 777 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 PEAR1Q5VY43 1037 aaPredicted RBP25.32■■□□□ 1.64
PRKCH-216ENST00000555542 MYEOVQ96EZ4 313 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 GTPBP2Q9BX10 602 aaKnown RBP25.32■■□□□ 1.64
PRKCH-216ENST00000555542 TMEM245Q9H330 911 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 SLC6A14Q9UN76 642 aa25.32■■□□□ 1.64
PRKCH-216ENST00000555542 MUC22E2RYF6 1773 aaPredicted RBP25.31■■□□□ 1.64
PRKCH-216ENST00000555542 LUC7L3O95232 432 aaKnown RBP25.31■■□□□ 1.64
PRKCH-216ENST00000555542 MOCS3O95396 460 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 IGLV3-25P01717 112 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 CCR1P32246 355 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 NME3Q13232 169 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 CAMK2GQ13555 558 aaPredicted RBP25.31■■□□□ 1.64
PRKCH-216ENST00000555542 PTPRNQ16849 979 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 SASS6Q6UVJ0 657 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 FAM124AQ86V42 546 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 TMEM35BQ8NCS4 154 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 ENOX1Q8TC92 643 aaKnown RBP25.31■■□□□ 1.64
PRKCH-216ENST00000555542 GPT2Q8TD30 523 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 ZNF419Q96HQ0 510 aaPredicted RBP25.31■■□□□ 1.64
PRKCH-216ENST00000555542 SLC2A13Q96QE2 648 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 FSCN3Q9NQT6 498 aa25.31■■□□□ 1.64
PRKCH-216ENST00000555542 WSB2Q9NYS7 404 aaPredicted RBP25.31■■□□□ 1.64
PRKCH-216ENST00000555542 KCNU1A8MYU2 1149 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 CDX4O14627 284 aaPredicted RBP25.3■■□□□ 1.64
PRKCH-216ENST00000555542 KCNK5O95279 499 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 SERPINF2P08697 491 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms