RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PPP2R3CQ969Q6 453 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 ZNF518BQ9C0D4 1074 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 PCDHGC3Q9UN70 934 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 XPO1O14980 1071 aaKnown RBP17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 TBC1D12O60347 775 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 CDK7P50613 346 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 MPZL3Q6UWV2 235 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 PID1Q7Z2X4 250 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 TTC30AQ86WT1 665 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 CCNYL1Q8N7R7 359 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 USP33Q8TEY7 942 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 CENPKQ9BS16 269 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 PREBQ9HCU5 417 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 KLK14Q9P0G3 267 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 TK2O00142 265 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 ITGA2BP08514 1039 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 ZNF618Q5T7W0 954 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 PACS1Q6VY07 963 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 ARHGAP22Q7Z5H3 698 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 PDSS2Q86YH6 399 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 ICA1LQ8NDH6 482 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 MFSD3Q96ES6 412 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 SCYL1Q96KG9 808 aa17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 MMADHCQ9H3L0 296 aaPredicted RBP17.53■□□□□ 0.4
PPP4R3A-208ENST00000555462 C15orf38-AP3S2A0A0A6YYH1 394 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 PLIN3O60664 434 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 CILPO75339 1184 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 GSTA2P09210 222 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 CNGA3Q16281 694 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 SLC5A9Q2M3M2 681 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 ARPINQ7Z6K5 226 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 RNF135Q8IUD6 432 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 PCDH20Q8N6Y1 951 aaKnown RBP17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 KIF12Q96FN5 646 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 SPATA33Q96N06 139 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 ANLNQ9NQW6 1124 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 UBAP1Q9NZ09 502 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 SSX2IPQ9Y2D8 614 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 DTNAQ9Y4J8 743 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 SNX10Q9Y5X0 201 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 COL4A5P29400 1685 aa17.52■□□□□ 0.4
PPP4R3A-208ENST00000555462 GABBR2O75899 941 aa17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 XRCC1P18887 633 aaPredicted RBP17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 TUBB3Q13509 450 aa17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 LRRC23Q53EV4 343 aaPredicted RBP17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 FAM83AQ86UY5 434 aa17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 SORT1Q99523 831 aa17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 PPCSQ9HAB8 311 aa17.52■□□□□ 0.39
PPP4R3A-208ENST00000555462 C9JVG2 144 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 TSPAN8P19075 237 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 CRHR1P34998 444 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 USP46P62068 366 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 SOWAHAQ2M3V2 549 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 ZNF280DQ6N043 979 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 RDM1Q8NG50 284 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 C18orf25Q96B23 403 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 MCRS1Q96EZ8 462 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 HIC2Q96JB3 615 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 SUDS3Q9H7L9 328 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 SLC39A10Q9ULF5 831 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 AP4E1Q9UPM8 1137 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 MAGEB3O15480 346 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 SNNO75324 88 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 CRABP2P29373 138 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 ETFBP38117 255 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 CYP2R1Q6VVX0 501 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 STRA8Q7Z7C7 330 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 ERLEC1Q96DZ1 483 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 CDHR1Q96JP9 859 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 NPAS2Q99743 824 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 DTLQ9NZJ0 730 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 GMPR2Q9P2T1 348 aaKnown RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 CPA3P15088 417 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 THOP1P52888 689 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 NME5P56597 212 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 GADL1Q6ZQY3 521 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 RCN3Q96D15 328 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 FCRL3Q96P31 734 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 GOLGA2P5Q9HBQ8 144 aa17.51■□□□□ 0.39
PPP4R3A-208ENST00000555462 MFSD11O43934 449 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 MAFO75444 373 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 COX4I1P13073 169 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 UQCRBP14927 111 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 PRKCHP24723 683 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 PTPN7P35236 360 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 ALDH1A3P47895 512 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 GMPSP49915 693 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 PITRM1Q5JRX3 1037 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 CERCAMQ5T4B2 595 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 SEPT1Q8WYJ6 367 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 ATP2A3Q93084 1043 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 FAM49AQ9H0Q0 323 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 SYNPO2Q9UMS6 1093 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 CROCCQ5TZA2 2017 aa17.5■□□□□ 0.39
PPP4R3A-208ENST00000555462 RNF103O00237 685 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms