RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CCDC6Q16204 474 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 DUOXA1Q1HG43 343 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 DCAF6Q58WW2 860 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 ACBD5Q5T8D3 534 aaPredicted RBP12.27□□□□□ -0.45
VRK1-204ENST00000555351 RFWD3Q6PCD5 774 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 ZNF677Q86XU0 584 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 MFN1Q8IWA4 741 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 CADM4Q8NFZ8 388 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 OR2T3Q8NH03 318 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 GPT2Q8TD30 523 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 PIGKQ92643 395 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.45
VRK1-204ENST00000555351 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 PRICKLE1Q96MT3 831 aaPredicted RBP12.27□□□□□ -0.45
VRK1-204ENST00000555351 EDEM2Q9BV94 578 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 NUSAP1Q9BXS6 441 aaKnown RBP12.27□□□□□ -0.45
VRK1-204ENST00000555351 MKRN2Q9H000 416 aaKnown RBP12.27□□□□□ -0.45
VRK1-204ENST00000555351 ANO10Q9NW15 660 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 AJAP1Q9UKB5 411 aaPredicted RBP12.27□□□□□ -0.45
VRK1-204ENST00000555351 RAD54BQ9Y620 910 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 DNAH14Q0VDD8 3507 aa12.27□□□□□ -0.45
VRK1-204ENST00000555351 ABCA7Q8IZY2 2146 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 GOLGA6L7A0A1B0GV03 622 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 MED19A0JLT2 244 aaPredicted RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 DCDC2BA2VCK2 349 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 NDUFS2O75306 463 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 DAB1O75553 588 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 LUC7L3O95232 432 aaKnown RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 EPHX1P07099 455 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 SERPINF2P08697 491 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 CYP11B1P15538 503 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 ABCB4P21439 1286 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 PRKCHP24723 683 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 CD6P30203 668 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 NOS2P35228 1153 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 SGSHP51688 502 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 COPAP53621 1224 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 ZNF33AQ06730 810 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 PTPRNQ16849 979 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 ZC3H12AQ5D1E8 599 aaKnown RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 SYCP2LQ5T4T6 812 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 DAB2IPQ5VWQ8 1189 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 MBLAC2Q68D91 279 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 SASS6Q6UVJ0 657 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 OLFML1Q6UWY5 402 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 KIAA1324Q6UXG2 1013 aaKnown RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 ARCQ7LC44 396 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 TMPRSS6Q8IU80 811 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 DEFB106AQ8N104 65 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 FRMD1Q8N878 549 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 MSANTD4Q8NCY6 345 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 ANKRD20A12PQ8NF67 263 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 PGAP3Q96FM1 320 aaPredicted RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 PPP1R9BQ96SB3 815 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 NUP58Q9BVL2 599 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 LSM14BQ9BX40 385 aaKnown RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 TMEM9BQ9NQ34 198 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 RXFP3Q9NSD7 469 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 WSB2Q9NYS7 404 aaPredicted RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 KIAA1522Q9P206 1035 aaPredicted RBP12.26□□□□□ -0.45
VRK1-204ENST00000555351 TJP2Q9UDY2 1190 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 SLC6A14Q9UN76 642 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 CYP8B1Q9UNU6 501 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 FHOD1Q9Y613 1164 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 CEP192Q8TEP8 1941 aa12.26□□□□□ -0.45
VRK1-204ENST00000555351 LRRC10BA6NIK2 292 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 F5H5T6 163 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 F8VZ95 297 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 PES1O00541 588 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 MOCS3O95396 460 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 F9P00740 461 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 ERBB2P04626 1255 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 SRPRAP08240 638 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 ADRB1P08588 477 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 TACR2P21452 398 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 ITPKAP23677 461 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 CD70P32970 193 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 MATKP42679 507 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 TPMTP51580 245 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 ST8SIA6P61647 398 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 RPS24P62847 133 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 MYL5Q02045 173 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 SFSWAPQ12872 951 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 CDH18Q13634 790 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 RAPGEF1Q13905 1077 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 KRT31Q15323 416 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 TAF5Q15542 800 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 STX1AQ16623 288 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 PTPN20Q4JDL3 420 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 FNDC3BQ53EP0 1204 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 TRIM61Q5EBN2 209 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 PPM1JQ5JR12 505 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 WDR45BQ5MNZ6 344 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 RABGAP1LQ5R372 815 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms